Haloquadratum walsbyi DSM 16790: HQ_2941A
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Entry
HQ_2941A CDS
T00375
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HQ_2941A (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_2941A (rpoD)
Enzymes [BR:
hwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HQ_2941A (rpoD)
Transcription machinery [BR:
hwa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HQ_2941A (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
CAJ53045
UniProt:
Q18G56
LinkDB
All DBs
Position
complement(2241206..2241994)
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AA seq
262 aa
AA seq
DB search
MTDDFDIEFIERDTDDRSARFLVRGVTPAVANGIRRAMVADIPTFSIEDVRFVENSSVMF
DEMIGLRLGLVPLTTPVDDFDIGDTVTLSLDITGPQTAYSGDIVSSDRLVEPADENIPII
ELKENHRLELEADAVLDTGKSHAKQQGGVAVGYRHLQRIEVIGDADEFADEDPHILRGVI
EEGAATHAVDETATNGDLIPTTEFDNDLTNRYPGKELTVSDVPNAVVFHVETDGSFSVPE
LVERAARSLGDRAAELETKVAI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgattttgacattgagttcatcgaacgcgataccgatgaccgaagtgcacgc
tttcttgttcggggtgtgacccccgcagtcgcaaatgggattcggcgcgcgatggttgcc
gacattccgacattcagtattgaggacgttcgctttgtcgagaattcatcggtgatgttt
gatgagatgatcgggcttcgattagggctggtcccattaacaacacctgttgatgacttc
gatatcggagatacagtgacgctttcgcttgatataaccggtccacaaacagcgtactcc
ggtgatattgtctcatccgaccgtcttgttgagcctgctgatgaaaacatcccgattatt
gaactcaaggagaatcaccgacttgaacttgaggctgatgcggttcttgacaccggaaag
tctcacgccaagcaacagggtggtgttgctgttggatataggcacctccagcgtatcgaa
gtcatcggtgatgctgatgagtttgctgatgaggacccgcatatcctccgaggtgttatc
gaagagggcgcagccacgcatgccgttgatgagacagcaacaaatggggatttgattccc
acaacagaattcgataatgacctcacgaaccgatatcctgggaaggaactcaccgtctca
gatgttccaaatgccgttgtatttcatgtcgagacagatggatcctttagcgttcccgaa
cttgttgaacgagcagcgcgttcactcggtgaccgtgcagctgaacttgagacaaaggtt
gccatctga
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