Helicobacter winghamensis: A0Z60_01225
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Entry
A0Z60_01225 CDS
T07030
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hwi
Helicobacter winghamensis
Pathway
hwi00540
Lipopolysaccharide biosynthesis
hwi01100
Metabolic pathways
hwi01250
Biosynthesis of nucleotide sugars
Module
hwi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A0Z60_01225 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hwi01005
]
A0Z60_01225 (rfaD)
Enzymes [BR:
hwi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
A0Z60_01225 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hwi01005
]
Core region
A0Z60_01225 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
KR
Ldh_1_N
ThiF
Motif
Other DBs
NCBI-ProteinID:
QOQ98248
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Position
239294..240307
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AA seq
337 aa
AA seq
DB search
MRYINDSLKGKKILITGGAGFIGSNLALYFQKHHKAEVIIFDSFRSEKTFHNGHFKSLGH
FKNLLDFKGEVIAGDITNKADLERLESYNFDYIFHQAAISDTTVMDQEAVLRANVNAYKD
LLDLCVRQGAKMIYASSAGVYGNSPAPNSIGSGEIPENVYGFSKLMMDNLTQKYLQQYPN
LSIVGLRYFNVYGNKEVYKGKTASMILQLGLQALEQKRVRLFKMGEQKRDFVYIEDVIQA
NIKAMESKKSGVYNVGSGNARSFNDIIACLKMDLGEFEVEYFDNPYAFFQTHTEANITLT
KEFLGYTPRFSLEVGVKNYLPEIKAIHANGLWNAIVG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatatcaatgattctttaaaagggaaaaagattctaatcacaggtggagctggg
tttattggctcaaacttggcactttattttcaaaaacaccataaggctgaagtgattatt
tttgatagcttcagaagcgaaaaaacttttcacaatgggcattttaaatcacttgggcat
tttaaaaatttattagattttaaaggtgaagtgattgctggagatataacaaataaagca
gatttagagcgtttagaatcttataattttgactatatctttcatcaagcagcaatctct
gatacaacggtgatggatcaagaagcggtgttgcgcgcaaatgttaatgcttataaggat
ttgctagatttatgcgtgcgtcaaggggcaaaaatgatttatgcttcaagtgcgggagtg
tatggaaattcccctgcgccaaatagcataggaagcggagagattccagaaaatgtgtat
ggattttcaaagctaatgatggataatcttacgcaaaaatatttgcagcaataccctaat
ttaagcattgtgggcttgcgttattttaatgtgtatggaaacaaagaggtctataaaggc
aaaaccgcgtcaatgattttacagcttggattgcaagccctagagcaaaaaagggtgaga
ctttttaaaatgggagagcaaaagcgtgattttgtgtatattgaagatgtgattcaagca
aatatcaaggcaatggaatctaaaaaaagtggtgtgtataatgtaggaagtggcaatgcg
cgctcttttaacgatattattgcgtgtttgaaaatggatttaggggagtttgaagtggag
tattttgataatccttatgcgttttttcaaacacacacagaggcaaatatcacgctgaca
aaggaatttttaggttacactccgcgcttttctttagaagttggggtgaaaaattatttg
cctgaaattaaggcaatccacgcaaatggcttgtggaatgcaattgtaggataa
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