Halopiger xanaduensis: Halxa_1889
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Entry
Halxa_1889 CDS
T01532
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hxa03016
]
Halxa_1889
Enzymes [BR:
hxa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Halxa_1889
Transfer RNA biogenesis [BR:
hxa03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Halxa_1889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
AEH36516
UniProt:
F8D5T7
LinkDB
All DBs
Position
complement(1206900..1208153)
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AA seq
417 aa
AA seq
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MARYHIETYGCTSNRGESREIERRLRDAGHYRVDGPEVADVAILNTCTVVEKTERNMLRR
AEELADETADLFITGCMALAQGEEFRAADIDGQVLHWDEVPEAVTNGECPTTTPDAEPIL
DGVVGILPIARGCMSNCSYCITKEATGKIDSPPVEENVEKARALIHAGAKEIRITGQDTG
VYGWDTGERKLHELLERICEIEGDFRVRVGMANPKGVHGIREELAEVFAEHDELYDFLHA
PVQSGSDDVLGDMRRQHQVEEYVEVVETFDDRLDYWTLSTDFIVGFPTETEHDHEQSMAL
LRETRPEKINVTRFSKRPGTDAAEMKGLGGTVKKERSKEMSELKREIVADAYEDMVGERR
EDCLVVEEGTADSVKCRDSAYRQIIVQNASDHGLEPGDFVDLEVTAHETMYAFGDPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtaccacatcgaaacgtacggttgcacgtccaatcgcggcgagagccgcgag
atcgagcgacggctccgcgatgccggccactaccgggtcgacggccccgaggtggccgac
gtcgccatcctcaacacctgtaccgtcgtcgagaagaccgagcggaacatgctccgccgc
gccgaggaactggccgacgagaccgcagacctgttcatcaccggctgcatggccctcgcg
cagggcgaagagttccgcgcggccgacatcgacggccaggtgctccactgggacgaggtc
cccgaggccgtcacgaacggcgagtgcccgaccacgacgcccgacgccgaacccattctg
gacggcgtcgtcggcatcctgccgatcgcacggggctgcatgtccaactgctcgtactgc
atcaccaaggaggcgaccggcaagatcgactcgccgccggtcgaggaaaacgtcgagaag
gcccgcgcgctgatccacgccggcgccaaagaaatccggattacgggccaggacaccggc
gtctacggctgggacacgggcgagcgcaaactccacgaactgctcgagcgcatctgcgag
atcgagggcgacttccgggtccgcgtggggatggccaacccgaagggggtccacggcatc
cgcgaagaactcgcggaggtcttcgccgaacacgacgaactctacgacttcctgcacgca
cccgtccagtcgggcagcgacgacgtgctcggcgacatgcgccgccagcaccaggtcgag
gagtacgtcgaggtcgtcgagacgttcgacgaccgcctcgactactggacgctctcgacg
gacttcatcgtcggcttcccgaccgagaccgaacacgaccacgagcagtcgatggcgctc
ctgcgcgagacgcgcccggagaagatcaacgtcacccgcttctcgaagcgccccggcacc
gacgccgccgagatgaaggggctgggcggcacggtcaagaaggaacgctcgaaggagatg
agcgaactcaagcgcgagatcgtcgccgacgcctacgaagacatggtcggcgaacgccgc
gaggactgtctcgtcgtcgaggagggcaccgccgactccgtgaagtgtcgcgactcggcg
tatcgccagatcatcgttcaaaacgccagcgaccacggcctcgagcccggcgacttcgtc
gacctcgaggtgacggcccacgagacgatgtacgcgttcggcgacccggtgtag
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