KEGG   Hymenobacter sp. DG25B: PK28_03125
Entry
PK28_03125        CDS       T03500                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hyd  Hymenobacter sp. DG25B
Pathway
hyd03030  DNA replication
hyd03410  Base excision repair
hyd03420  Nucleotide excision repair
hyd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PK28_03125
   03410 Base excision repair
    PK28_03125
   03420 Nucleotide excision repair
    PK28_03125
   03440 Homologous recombination
    PK28_03125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyd03032]
    PK28_03125
   03400 DNA repair and recombination proteins [BR:hyd03400]
    PK28_03125
Enzymes [BR:hyd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PK28_03125
DNA replication proteins [BR:hyd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PK28_03125
DNA repair and recombination proteins [BR:hyd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PK28_03125
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PK28_03125
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 RNase_H_2 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AIZ62927
UniProt: A0A0A7LMW0
LinkDB
Position
complement(717538..720414)
AA seq 958 aa
MTDASAAPQHHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAQKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKKIIKAFNIPILMVDGFEA
DDVIGTLALRAEQQGFGEVFMMTPDKDYCQLVTDCVKIYRPAFMGNSAEVLDVQHVLQRF
EVERVEQVIDILGLQGDASDNIPGIPGIGDKTAKKLIQEFGSVENLIANTDKLKGKLQEN
VRNYAEQGLMSKELATIHLDVPIEFHEENLRLEQPNADMLRQLFDELEFRQLAARVLGGG
NAPATSTPPPRGARRPSVPAGQGSLFDAPGAVAVAAEEGETGAFGAPAGPRRQLADVPHQ
YHLIDTPELRRELLKFLLLQKEVSFDTETTGLDTMTARLVGLSFCWLPGEAYYVPVPHDD
QEAAQQLVDEFRPFFDAEQILKIGQNIKYDLTILKHYGIEIKGQLFDTMLAHYLLEPDMR
HNMDVLAETYLHYTPVSIIELIGPKGKKQKTMADIPPAEVKDYACEDADVTLQLKHYFEP
RLEAVGLLKLLNEVENPLVPVLAAIEYEGVKIDSAAMGEYSAQLQGYITELEGQIFAEAG
QSFNIGSPKQLGEVLFDKMGLGGGKIKKTKTGQYATGEEILSVLAADAPIASLILEHRQL
TKLRSTYVEALPQLVCELDGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIRKAF
VPRDADHVLLAADYSQIELRIMADFSGDKTMIESFRQGLDIHASTASKVFKVPLDQVDGE
MRRKAKMVNFGIIYGISAFGLAQRLGVSRKEATEIIEAYFTEFSSVKKFMDDSINRAREL
EYAETLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHHWLLEEKL
GTKMILQVHDELVFDAVKSEIDYITPKIRELMINALPLPHGVPMEVEVGTGSNWLQAH
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgaccgacgcctccgccgctccccagcaccataaactcttcctgctcgacgcttttgcc
ctgatttaccgcgcccactttgccttcagcaaaaacccgcgcgtgaactccaagggcctg
aataccggcgctatcctgggctttaccaacaccctggtggaggtactgcaaaaggagaag
cccacgcacattggcgtggccttcgatgcgcagaaaaaaaccttccgccatgagcagtac
gcggagtacaaagcccagcgccaggccatgccggaggacattgggctggccattccttac
atcaagaaaatcatcaaagccttcaacattcccattctgatggtggatggctttgaggcc
gatgacgtgattggtaccctggcgctgcgcgccgagcagcagggctttggcgaggtgttc
atgatgacgcccgacaaggactattgccagctggtgacggactgcgtgaagatttaccgc
ccggcctttatgggcaactccgccgaggtgctggatgtgcagcacgtgctgcagcgcttc
gaggtggagcgggtagagcaggtgattgacattctgggtttgcagggtgacgcatccgac
aacattcccggcattcccggcatcggcgacaaaaccgccaaaaagctgattcaggagttt
ggctcggtagaaaacctcattgccaacaccgataagctgaagggcaagctgcaggaaaac
gtgcgcaactacgccgagcagggcctgatgagcaaggagctggccaccatccatctggat
gtgcccattgagtttcatgaggaaaacctgcgcctggagcagcccaatgccgatatgctg
cgccagctgtttgatgagctggaattccggcagctggctgcccgcgtgttgggcggcggc
aatgccccggccaccagcaccccaccgccgcgcggcgcccgcaggcccagcgtacccgcc
gggcagggttccctgtttgatgcgcccggcgccgtagcggtagcggccgaggaaggcgaa
accggcgcctttggtgcccctgccggaccgcgccgccaactggccgatgtgccgcaccag
tatcacctgatagataccccggagctgcgccgcgaactgctgaaattcctgctgctgcaa
aaagaggtcagctttgataccgaaaccacagggctggacaccatgacagcccggctggta
ggcctctccttctgctggctgcccggcgaggcctactacgtgcccgtaccgcacgacgac
caggaagctgcccagcagctggtagatgagttccgtccgttctttgatgccgagcagatt
ctaaaaatcggtcagaacatcaagtacgacctcactattctcaagcactacggaatagag
attaaagggcagctctttgataccatgctggcccactacctgctggagcccgatatgcgc
cacaacatggacgtgctggcggaaacctacctgcactacacgcccgtctccattattgag
ctcattggccctaaaggtaagaagcagaaaaccatggccgacattcccccggctgaggtg
aaggattacgcctgcgaggatgccgacgtcacgctgcagctcaagcactacttcgagccc
aggctggaggccgtggggctgctgaagctgctgaatgaggtagaaaacccgctggtgccc
gtgctggccgctattgagtacgaaggcgtaaagattgacagcgccgccatgggcgaatac
tcggcgcagctgcagggctacattaccgagctggaaggccagatttttgccgaagccggc
cagtcgttcaacatcggctcacctaagcaattgggcgaggtgctgtttgataagatgggc
ctgggcggcggtaaaatcaagaaaaccaaaaccgggcaatacgccaccggcgaggaaatt
ctgagcgtgctggccgccgatgcgcccattgccagcctcattctggagcaccgccagctt
accaagctgcgcagcacctacgtagaggccctgccccagctggtctgtgagctggatggc
cgcgtgcatacctccttcaaccaggccgtaacggccacgggccgcctgagcagcaccaac
cccaacctgcagaacattcctatccgcacggagaagggccgcgaaattcgcaaggccttt
gtaccgcgcgatgctgaccacgtgctgctggccgccgactactcgcagattgagctgcgc
atcatggccgatttctccggcgacaaaaccatgattgagtcgttccgccaggggctggat
attcacgccagcacggccagcaaagtgtttaaagtgccgctggaccaggtagatggcgaa
atgcgccgcaaggctaaaatggtcaacttcggcatcatctacggcatttcggccttcggg
ctggcccagcgcctgggcgtttcgcgcaaggaggctaccgaaattattgaagcttatttc
acggagttttcctcggtgaagaagtttatggacgacagcattaaccgcgcccgggagctg
gagtacgccgaaaccctgctgggccgccgccgctacctgcgcgacatcaattcccgcaac
gccacgctccgcggctacacggagcgcaacgccattaacgcccccatccagggcaccgcg
gctgatatcatcaagaaggccatgatcaacattcatcactggctgctggaagaaaaactg
ggcaccaaaatgattctgcaggtgcacgacgaattggtgtttgatgctgtgaagtcggaa
atcgactacatcacgcccaaaatcagggagctgatgattaatgccctgcccctgccccac
ggcgtacccatggaggtggaggtaggcaccggcagcaactggctgcaggcgcactag

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