Hydrogenophaga crassostreae: LPB072_10460
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Entry
LPB072_10460 CDS
T04505
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyl
Hydrogenophaga crassostreae
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyl03009
]
LPB072_10460 (rimO)
Enzymes [BR:
hyl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LPB072_10460 (rimO)
Ribosome biogenesis [BR:
hyl03009
]
Prokaryotic type
ribosomal protein modification factors
LPB072_10460 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AOW13214
UniProt:
A0A167IEY6
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All DBs
Position
2260447..2261832
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AA seq
461 aa
AA seq
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MIETVATPGAAAPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADLVIVNTCGF
IDDAVKESLDTIGEALAENGKVIVTGCLGAREGEGGGNMVRNIHPSVLAVTGPHATHEVM
TAVHKHLPKPHDPFVDLVPAQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI
GDVLTEARKLFESGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVKTRMFDLVKSLGELAK
GFGAWVRLHYVYPYPHVDDIIPLMAEGLCLPYLDVPLQHSHPDVLKRMKRPASGERNLER
IARWRELCPEIVIRSTFIAGFPGETEAEFQHLLDFAQEARIDRAGCFAYSPVNGAVANSL
ADPVPAGLRDERRARFMAVAEAVSADKLRERVGATMQVLVDSAPGLGKKGGVGRSFADAP
EIDGVVKLQPPEKISKTLKVGEFTKARIVAAEGHDLIAVPF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccgttgccacgccgggcgctgctgcgcccaaagtcgggtttgtgagcctg
ggttgccccaaggccctgaccgactctgaacttatcctcacgcagctcagcgctgaggga
taccaaacctccaagacatttgcgggcgccgatttggtgatcgtgaacacctgcggcttc
attgatgacgcagtcaaagaaagtctggacacgattggggaagccctggccgaaaatggc
aaggtgatcgtgaccggctgccttggcgctcgcgaaggcgagggcggtggcaacatggtc
cgcaatatccaccccagcgttttggctgtcactgggccacacgccacccatgaggtgatg
acggcggtacacaagcatttgcccaaaccgcatgatccgttcgtggaccttgttcctgcg
cagggcatcaagctcacgccccgccattacgcatacctgaaaatcagcgaaggctgcaac
caccgctgcacgttctgcatcatcccttcgatgcggggtgatctggtgagccgtccgatt
ggcgatgtgttgactgaggcgcgcaagctgtttgagtctggcgtgaaagaattgttggtg
gtgagccaagacacttcagcctatggtgtggacgtaaagtaccgcaccggattttgggat
ggcaaaccagtgaagacccggatgtttgatctggtcaagtcgctgggcgagctggccaaa
ggatttggcgcctgggtgcgcttgcactatgtgtatccgtacccccatgtagacgacatc
attccgctgatggctgaaggcctgtgtttgccatatctggacgtgcccttgcaacacagc
catcctgatgtgctcaaacgcatgaagcggcccgccagcggcgagcgaaatttggagcgc
atcgcccgttggcgcgagctgtgcccggaaatagtgattcgcagcaccttcatcgccgga
tttcctggcgaaaccgaagccgagtttcagcatctgctggatttcgcacaagaagcgcgc
attgatcgcgcgggttgctttgcatactcacccgtcaacggtgctgtggcgaactcgctg
gccgacccggtacccgctggtttgcgcgacgagcgccgtgcgaggttcatggcagtggcg
gaggctgtgtcggcagacaagttgcgtgaacgagtcggtgccacgatgcaggtgctggtt
gattcggcgccgggtctgggcaagaagggtggcgttgggcgaagttttgccgatgcgccc
gagattgacggggtggtaaaactgcagcctcccgagaagataagcaagaccttaaaggtg
ggtgagttcaccaaggcgcgcatcgtggcagcagagggacacgacttgattgcggtcccg
ttttga
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