Hymenobacter sp. APR13: N008_06875
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Entry
N008_06875 CDS
T03213
Name
(GenBank) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hym
Hymenobacter sp. APR13
Pathway
hym03030
DNA replication
hym03410
Base excision repair
hym03420
Nucleotide excision repair
hym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N008_06875
03410 Base excision repair
N008_06875
03420 Nucleotide excision repair
N008_06875
03440 Homologous recombination
N008_06875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hym03032
]
N008_06875
03400 DNA repair and recombination proteins [BR:
hym03400
]
N008_06875
Enzymes [BR:
hym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N008_06875
DNA replication proteins [BR:
hym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N008_06875
DNA repair and recombination proteins [BR:
hym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N008_06875
NER (nucleotide excision repair)
GGR (global genome repair) factors
N008_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AII51707
UniProt:
A0A076HSU4
LinkDB
All DBs
Position
1616073..1618958
Genome browser
AA seq
961 aa
AA seq
DB search
MTPDAPAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAAKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKQIIKAFHIPILMVEGYEA
DDVIGTLARRAEAQGFGEVFMMTPDKDYCQLVTDCIKIYRPAFMGNAAEILDVAHVLQRF
EVERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDQLKGKQQEN
VRNFAEQGLMSKELATIHLDVPIEFEADKLVLDQPDADQLRQLFDELEFRQLAARVLGGG
SPAGVSAAPASRGARRPKTAEGQGSLFGSSADAAVAISAEEGETGEFGAPAGPRRTLQDV
PHQYHLMDTPELRASLLEFLLQQTEVSFDTETTGLDIMTARLVGLSFCWLPGEAYYVPVP
TDDHAATQALVDEFCPFFEAQHILKIGQNIKYDLTILKHYHVQVSGPLFDTMLAHYLLEP
DMRHGMDVLAETYLHYTPVPITDLIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHV
FEPMLKEVGLLDLLNEVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIVDLEKQIFA
EAGQEFNIGSPKQLGEVLFDKMDIGKGKIKKTKTGQYATGEEILSQLAADNPIAALILEY
RQLTKLRSTYVEALPQLVNVADGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDASHVLLAADYSQVELRIMADFSGDQTMIEAFRQGLDIHTSTASKVFKVPLNEV
DGEMRRKAKTVNFGIIYGISAFGLAQRIGIGRKEATDIIETYFQEFPRVKQFMDESINQA
RELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHEWLRQ
EKLGTRMILQVHDELVFDAVQEEVAYITPKIKELMATALLLPHGVPLEVEVGTGQNWLQA
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgacgcccccgccgcccagccccacaagcttttcctgctcgacgccttcgcc
ctgatttaccgcgcccactttgccttcagcaagaacccgcgcgtgaactccaagggcctc
aacaccggagccatcctgggcttcaccaacacgctggtggaggtgctgcagaaggaaaag
cccacccacatcggggtggcgtttgatgccgccaagaagacgttccgccacgagcagtac
gccgagtacaaggcccagcgccaggccatgcccgaggatatcggcctagccattccctac
atcaagcagatcatcaaagccttccacatccccattttgatggtggaaggctacgaggcc
gacgacgtgattggcacgctggcccgccgcgccgaggcccagggcttcggcgaggtgttc
atgatgacgcccgataaggactactgccagctcgtgacggactgcatcaaaatctaccgg
ccggccttcatgggcaacgccgccgaaattctggatgtggcgcacgtgctgcagcgcttc
gaggtggagcggcccgagcaggtgattgacattctagggttgcagggcgacgcttctgac
aacattccgggcattccgggcatcggcgaaaaaacggctaagaccctgattcagaagtac
ggctccgtcgaaaacctgattgctaacgtcgaccagctcaagggcaagcagcaggaaaac
gtgcgcaacttcgccgagcagggcctcatgagcaaggagttggccaccattcacctcgac
gtgcccatcgaatttgaggccgacaagctggtgctggatcaacctgatgctgaccagctg
cggcagctgttcgacgagctggaattccgccagctggccgcccgcgtgctgggcggcggc
agccccgccggcgtgagtgccgccccggcctcgcgtggagcgcggcggcccaaaaccgcc
gagggtcagggcagcctgtttggctcgtcggcggatgcggccgtagccattagcgccgag
gaaggcgaaaccggcgagtttggcgcgccagctgggccacgccgcacgctgcaggacgtg
ccgcaccagtaccacctgatggacacgcccgagctgcgcgcttctttgctggagttcctg
ctgcagcaaaccgaggtcagcttcgacaccgaaactaccgggctggatatcatgacggcg
cggctggtgggcctctccttctgctggctgcccggcgaggcctactacgtgcccgtgccc
accgacgaccacgccgccacccaggcgctggtggatgagttctgcccgtttttcgaggct
cagcacatcctcaaaatcggccagaacatcaagtacgacctcaccatcctcaagcactac
cacgtgcaggtgagtgggccgctgttcgacaccatgctggcccactacctgctggagccc
gatatgcgccacggcatggacgtgctggccgaaacctacctgcactacacgccggtgccc
atcaccgacctcatcggccccaaaggcaaaaaccagaaaaccatggccgacctgcccccg
gccgaggtgtcagactacgcctgcgaggatgccgacgtgacgctgcagctcaagcacgtg
ttcgagcctatgctcaaggaagtaggcctgctggatttgctcaacgaggtggaaaatccg
ctggtgccggtgctggccgacatcgagtacgagggcgtgaaaatcgactcctcggccatg
ggcgagtactcagccgagctgcagggctacatcgtggacctcgaaaagcagattttcgcg
gaagccggccaggaattcaacatcggctcgccgaagcaactgggcgaggtgctgttcgat
aaaatggacatcggcaaaggcaaaatcaagaagaccaagaccggccagtacgccaccggc
gaggaaatcctgagccagctggcagccgacaaccccattgctgcccttattctggaatat
cgccagctcacgaagctgcgcagcacctatgtggaggccctgccccagctggtgaacgta
gccgacggccgcgtgcacaccagcttcaaccaggccgtgacggccaccggccgcctcagc
agcaccaaccccaacctgcagaacattcctatccgcaccgagaagggccgggaaatccgc
aaggccttcgtgccccgcgacgccagccacgtgctgctggccgccgactactcgcaggtg
gagctgcgcatcatggccgatttttcgggcgaccagaccatgattgaagccttccgccag
ggcctcgacatccacaccagcacggccagcaaggtgttcaaagtaccgctgaatgaggtg
gacggcgagatgcgccgcaaggccaaaaccgtcaacttcggcatcatctacggcatttcg
gccttcgggctggcccagcgcatcggcatcggccgcaaggaagctaccgacatcatcgag
acgtacttccaggagttcccgcgggtgaagcagtttatggatgagagcatcaaccaggcc
cgggaactggagtatgccaccaccctgctgggccgccgccgctacctgcgcgacatcaac
tcgcgcaacgccaccctgcgcggctacaccgagcgcaacgccatcaacgcccccatccag
ggcaccgcggccgacatcatcaagaaggccatgatcaacatccacgagtggctgcgccag
gaaaagctcggcacccgcatgattctgcaggtgcacgacgaactggtgttcgacgccgtg
caggaggaagtggcctacatcacgcccaaaatcaaggagttgatggccaccgccttgctc
ttgccccacggcgtgccgctggaagtggaagtcggcaccggccagaactggctgcaggcg
cactaa
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