KEGG   Hymenobacter sp. APR13: N008_06875
Entry
N008_06875        CDS       T03213                                 
Name
(GenBank) hypothetical protein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hym  Hymenobacter sp. APR13
Pathway
hym03030  DNA replication
hym03410  Base excision repair
hym03420  Nucleotide excision repair
hym03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N008_06875
   03410 Base excision repair
    N008_06875
   03420 Nucleotide excision repair
    N008_06875
   03440 Homologous recombination
    N008_06875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hym03032]
    N008_06875
   03400 DNA repair and recombination proteins [BR:hym03400]
    N008_06875
Enzymes [BR:hym01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     N008_06875
DNA replication proteins [BR:hym03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     N008_06875
DNA repair and recombination proteins [BR:hym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     N008_06875
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N008_06875
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 HHH_5 RNase_H_2
Other DBs
NCBI-ProteinID: AII51707
UniProt: A0A076HSU4
LinkDB
Position
1616073..1618958
AA seq 961 aa
MTPDAPAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAAKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKQIIKAFHIPILMVEGYEA
DDVIGTLARRAEAQGFGEVFMMTPDKDYCQLVTDCIKIYRPAFMGNAAEILDVAHVLQRF
EVERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDQLKGKQQEN
VRNFAEQGLMSKELATIHLDVPIEFEADKLVLDQPDADQLRQLFDELEFRQLAARVLGGG
SPAGVSAAPASRGARRPKTAEGQGSLFGSSADAAVAISAEEGETGEFGAPAGPRRTLQDV
PHQYHLMDTPELRASLLEFLLQQTEVSFDTETTGLDIMTARLVGLSFCWLPGEAYYVPVP
TDDHAATQALVDEFCPFFEAQHILKIGQNIKYDLTILKHYHVQVSGPLFDTMLAHYLLEP
DMRHGMDVLAETYLHYTPVPITDLIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHV
FEPMLKEVGLLDLLNEVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIVDLEKQIFA
EAGQEFNIGSPKQLGEVLFDKMDIGKGKIKKTKTGQYATGEEILSQLAADNPIAALILEY
RQLTKLRSTYVEALPQLVNVADGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDASHVLLAADYSQVELRIMADFSGDQTMIEAFRQGLDIHTSTASKVFKVPLNEV
DGEMRRKAKTVNFGIIYGISAFGLAQRIGIGRKEATDIIETYFQEFPRVKQFMDESINQA
RELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHEWLRQ
EKLGTRMILQVHDELVFDAVQEEVAYITPKIKELMATALLLPHGVPLEVEVGTGQNWLQA
H
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgactcctgacgcccccgccgcccagccccacaagcttttcctgctcgacgccttcgcc
ctgatttaccgcgcccactttgccttcagcaagaacccgcgcgtgaactccaagggcctc
aacaccggagccatcctgggcttcaccaacacgctggtggaggtgctgcagaaggaaaag
cccacccacatcggggtggcgtttgatgccgccaagaagacgttccgccacgagcagtac
gccgagtacaaggcccagcgccaggccatgcccgaggatatcggcctagccattccctac
atcaagcagatcatcaaagccttccacatccccattttgatggtggaaggctacgaggcc
gacgacgtgattggcacgctggcccgccgcgccgaggcccagggcttcggcgaggtgttc
atgatgacgcccgataaggactactgccagctcgtgacggactgcatcaaaatctaccgg
ccggccttcatgggcaacgccgccgaaattctggatgtggcgcacgtgctgcagcgcttc
gaggtggagcggcccgagcaggtgattgacattctagggttgcagggcgacgcttctgac
aacattccgggcattccgggcatcggcgaaaaaacggctaagaccctgattcagaagtac
ggctccgtcgaaaacctgattgctaacgtcgaccagctcaagggcaagcagcaggaaaac
gtgcgcaacttcgccgagcagggcctcatgagcaaggagttggccaccattcacctcgac
gtgcccatcgaatttgaggccgacaagctggtgctggatcaacctgatgctgaccagctg
cggcagctgttcgacgagctggaattccgccagctggccgcccgcgtgctgggcggcggc
agccccgccggcgtgagtgccgccccggcctcgcgtggagcgcggcggcccaaaaccgcc
gagggtcagggcagcctgtttggctcgtcggcggatgcggccgtagccattagcgccgag
gaaggcgaaaccggcgagtttggcgcgccagctgggccacgccgcacgctgcaggacgtg
ccgcaccagtaccacctgatggacacgcccgagctgcgcgcttctttgctggagttcctg
ctgcagcaaaccgaggtcagcttcgacaccgaaactaccgggctggatatcatgacggcg
cggctggtgggcctctccttctgctggctgcccggcgaggcctactacgtgcccgtgccc
accgacgaccacgccgccacccaggcgctggtggatgagttctgcccgtttttcgaggct
cagcacatcctcaaaatcggccagaacatcaagtacgacctcaccatcctcaagcactac
cacgtgcaggtgagtgggccgctgttcgacaccatgctggcccactacctgctggagccc
gatatgcgccacggcatggacgtgctggccgaaacctacctgcactacacgccggtgccc
atcaccgacctcatcggccccaaaggcaaaaaccagaaaaccatggccgacctgcccccg
gccgaggtgtcagactacgcctgcgaggatgccgacgtgacgctgcagctcaagcacgtg
ttcgagcctatgctcaaggaagtaggcctgctggatttgctcaacgaggtggaaaatccg
ctggtgccggtgctggccgacatcgagtacgagggcgtgaaaatcgactcctcggccatg
ggcgagtactcagccgagctgcagggctacatcgtggacctcgaaaagcagattttcgcg
gaagccggccaggaattcaacatcggctcgccgaagcaactgggcgaggtgctgttcgat
aaaatggacatcggcaaaggcaaaatcaagaagaccaagaccggccagtacgccaccggc
gaggaaatcctgagccagctggcagccgacaaccccattgctgcccttattctggaatat
cgccagctcacgaagctgcgcagcacctatgtggaggccctgccccagctggtgaacgta
gccgacggccgcgtgcacaccagcttcaaccaggccgtgacggccaccggccgcctcagc
agcaccaaccccaacctgcagaacattcctatccgcaccgagaagggccgggaaatccgc
aaggccttcgtgccccgcgacgccagccacgtgctgctggccgccgactactcgcaggtg
gagctgcgcatcatggccgatttttcgggcgaccagaccatgattgaagccttccgccag
ggcctcgacatccacaccagcacggccagcaaggtgttcaaagtaccgctgaatgaggtg
gacggcgagatgcgccgcaaggccaaaaccgtcaacttcggcatcatctacggcatttcg
gccttcgggctggcccagcgcatcggcatcggccgcaaggaagctaccgacatcatcgag
acgtacttccaggagttcccgcgggtgaagcagtttatggatgagagcatcaaccaggcc
cgggaactggagtatgccaccaccctgctgggccgccgccgctacctgcgcgacatcaac
tcgcgcaacgccaccctgcgcggctacaccgagcgcaacgccatcaacgcccccatccag
ggcaccgcggccgacatcatcaagaaggccatgatcaacatccacgagtggctgcgccag
gaaaagctcggcacccgcatgattctgcaggtgcacgacgaactggtgttcgacgccgtg
caggaggaagtggcctacatcacgcccaaaatcaaggagttgatggccaccgccttgctc
ttgccccacggcgtgccgctggaagtggaagtcggcaccggccagaactggctgcaggcg
cactaa

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