Hydrogenophaga sp. RAC07: BSY239_1242
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Entry
BSY239_1242 CDS
T04455
Name
(GenBank) catalytic LigB subunit of aromatic ring-opening dioxygenase family protein
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr00362
Benzoate degradation
hyr00624
Polycyclic aromatic hydrocarbon degradation
hyr00627
Aminobenzoate degradation
hyr01100
Metabolic pathways
hyr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BSY239_1242
00627 Aminobenzoate degradation
BSY239_1242
00624 Polycyclic aromatic hydrocarbon degradation
BSY239_1242
Enzymes [BR:
hyr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
BSY239_1242
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AOF87543
UniProt:
A0A1B3M366
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Position
complement(1320891..1321754)
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AA seq
287 aa
AA seq
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MARVSASVYTSHVPAIGAALDQGRSAEPYWAPVFGGYEASRAWLRENPPDVIVLVFNDHA
TAFGPDLVPTFAIGTGERFSPADEGWGARPVPVVQGHPELAAHIAQSAIQDDFDLTLVNR
MDVDHGLTVPLSLMFGQPPADDFRWPCPVIPLAVNVIQYPVPTGRRCLALGRAVRKAIES
YGEDLNVQVWGTGGMSHQLQGQRAGLINPVFDHAFMDMITTVPEAAAAISHVDFVREAGS
EGIELVMWLIARGAMPERPDGRAPTCVHRFYHVPASNTAVGHLVLTP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggtcagcgccagcgtctacacctcgcacgtgccggccatcggcgcagcactc
gaccagggccgctcggccgagccctattgggcgccggtgttcggcggctacgaggcttcg
cgcgcctggctgcgcgagaacccgcccgatgtgatcgtgctggtgttcaacgaccacgcc
accgccttcgggcctgatctcgttcccacctttgccatcggcaccggcgagcgcttctca
cccgccgacgaaggctggggcgcgcgcccggtgccggtggtgcaaggccaccccgagctg
gctgcgcacatcgcgcagagcgcgatccaggacgacttcgacctcacgctggtcaaccgc
atggacgtggaccacggcctgaccgtgccgctgtcgttgatgttcggtcagccgcccgcc
gacgatttccgctggccctgcccggtgattccgctggccgtcaacgtgatccagtacccg
gtgcccaccggccgtcgctgcctggccttgggccgcgcggtgcgcaaggcgatcgagagc
tatggtgaagatctcaacgttcaggtctggggcacggggggcatgagccaccagttgcag
ggccagcgcgccggcctgatcaaccccgtgttcgaccacgctttcatggacatgatcacc
accgtgcccgaggccgccgccgccatctcccatgtggatttcgtgcgcgaagccggcagc
gagggcatcgagctggtgatgtggctgatcgcgcgcggcgccatgcccgaacgccccgac
ggtcgcgcaccgacctgcgtgcaccgcttctatcacgtgcccgcgtccaacaccgccgtg
ggccacctcgtgctgacgccatga
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