Hymenobacter sp. PAMC 26628: AXW84_01380
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Entry
AXW84_01380 CDS
T04961
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyz03009
]
AXW84_01380
Enzymes [BR:
hyz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AXW84_01380
Ribosome biogenesis [BR:
hyz03009
]
Prokaryotic type
ribosomal protein modification factors
AXW84_01380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AMJ64234
UniProt:
A0A126P503
LinkDB
All DBs
Position
complement(226430..227743)
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AA seq
437 aa
AA seq
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MKVRNQNQNKVNVITLGCSKNIVDSEVLMGQLQANDFDVTHEATKSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGRLEKLYVTGCLSQRYKDELEVEIPQVDAYFGTLELPQMLK
VLNADYKHELVGERLLTTPRHYAYFKIAEGCNRPCSFCAIPLMRGKHVDRTMDDLVRDAG
RLAAQGTKELILIAQDLTYYGLQAYGERKLPELLRRLSDVNGIDWIRLQYAYPSQFPLEA
LDVMAERANICKYLDMPLQHGSDNMLKTMRRGITRRRTSELVDTIRQRVPGIALRTTLIA
GHPGETDADFDEMYEFVRQTRFERLGIFTYSHEDNTHSYTLEDNVPADVKQGRADAIMEL
QQGISLELNEARVGQTYKVLFDRKESGHFVGRTEFDSPEVDNEVLVPVEKNTFVRLGDFA
NVKITSATDFDLYGVLV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttagaaatcaaaaccaaaacaaggtcaacgtcatcacgctgggctgctcgaag
aacatcgtggacagcgaggtgctgatgggccagctccaggccaacgactttgacgtgacg
cacgaggcgacgaaaagcgacgccaacatcgtcatcatcaacacctgcggcttcatcgac
aacgccaagcaggagagcatcgacaccatcctgcgctacgccgacgagaaggaggccggc
cgcctggagaagctctacgtgacgggctgcctctcgcagcgctacaaggacgagctggag
gtggaaatcccgcaggtggacgcctacttcggcacgctggagctgccgcagatgctgaag
gtgctgaacgccgactacaagcacgagctggtgggcgagcgcctgctcaccacgccgcgc
cactacgcttacttcaaaattgccgagggctgcaaccgcccgtgctcgttttgcgccatc
ccgctgatgcgcggcaagcacgtggaccgcaccatggacgacctcgtgcgcgacgccggc
cgcctggccgcccagggcaccaaggagctgattctcattgcccaggacctgacttactac
ggcctgcaagcctacggcgagcgcaagctgcccgagctgctgcgccgcctctccgacgtg
aacggcatcgactggatccggctgcaatacgcctacccgtcgcaatttccgctggaggcc
ctggacgtgatggccgagcgcgccaacatctgcaagtacctcgacatgcccttgcagcac
ggctcggacaatatgctgaaaaccatgcgccgcggcatcacccgccgccgcacttcggag
ctcgtggacaccattcggcagcgggtgccgggcattgcactgcgcacaacactcatcgcc
ggccaccccggcgaaaccgacgccgacttcgacgagatgtacgagtttgtgcgccagacg
cggttcgagcggctgggcattttcacgtactcgcacgaagacaacacgcattcctacacg
ctggaagacaacgtccccgccgacgtgaagcagggccgcgccgacgccatcatggagctg
cagcagggcatttcgctggagctgaacgaggcccgcgtgggccagacatacaaggtgctc
ttcgaccgcaaggagagcggccacttcgtgggccgtaccgagttcgactcgcccgaggtg
gacaacgaggtactcgtgccggtggagaaaaacacgttcgtgcgcctcggcgattttgcc
aacgtgaaaatcacctcggctacggatttcgacctgtacggcgtgcttgtctga
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