Helicoverpa zea (corn earworm): 124640002
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Entry
124640002 CDS
T08400
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03020
RNA polymerase
hze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124640002
09124 Replication and repair
03420 Nucleotide excision repair
124640002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124640002
03400 DNA repair and recombination proteins [BR:
hze03400
]
124640002
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124640002
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124640002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
124640002
NCBI-ProteinID:
XP_047033514
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All DBs
Position
20:complement(4391867..4392874)
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AA seq
275 aa
AA seq
DB search
MPYANQPSVHITELTDDNVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVDKIRYSRDCMCADFCSECSVEFTLDVKCTGDQTRHVTTADL
KSSDPRVVPVTSRHRDEDQADYGETDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNIMRHTLYPKPDEWPKSEHTELDEDQYEAEFNWEAKPNKFFYNVESSGALK
PENIVLMGIIVLKNKLLNLQVQLAQEAQNDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgccaatcagccttctgtgcacatcactgaattgacagacgataatgtaaaa
ttcgtcgtcgaagacaccgagcttagcgtcgctaacagtatgagacgagtgtttatagcg
gaaaccccaacgatggctattgattgggtgcagcttgaggcaaattccactgttctaagt
gacgaattcttggcgcatcgtatcggtctcattccactaatttccgatgatgtagttgac
aagatacgttattcgcgagattgtatgtgcgctgatttctgttcagaatgcagcgtagag
ttcacactggacgtcaaatgcaccggagatcaaactagacacgttaccacagcagatcta
aagtcgagcgacccgagagtggtgcctgtgacgtcgcggcacagggatgaagaccaagcc
gactatggtgaaactgatgagattttaatcatcaaacttcggaaaggacaggagttgaaa
ttgagagcatatgctaagaaaggttttggaaaggaacatgctaaatggaaccccaccgct
ggtgtttcctttgaatatgaccctgacaatattatgagacatacactgtaccctaaacct
gacgagtggccaaaaagtgaacacactgaactagatgaagatcagtatgaagcagaattt
aattgggaggccaaacctaacaagtttttttataatgttgagtcatcgggggcactgaaa
cctgaaaatattgtcctcatgggtattatagtgttgaagaataaattgcttaatttacaa
gtacagttggctcaggaagcacaaaacgatgcattagctatcaattaa
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