Helicoverpa zea (corn earworm): 124640211
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Entry
124640211 CDS
T08400
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124640211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124640211
Enzymes [BR:
hze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124640211
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124640211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124640211
NCBI-ProteinID:
XP_047033834
LinkDB
All DBs
Position
20:complement(841347..858715)
Genome browser
AA seq
1386 aa
AA seq
DB search
MPKEQYRETYVGRKISHVTFNVDSASAIQQAAHIQVITKNLYAQDGQRVPATYGVLDRRM
GTNQKDANCETCGLGLAECVGHYGYIELALPVFHVGYFRSIITILQTICKECAKVMLAEP
LKKSFRRKFMNPELSYLHKKNLRAAVLKKAKTCTKCPYCEALNGMVKKSPAGILKIIHDK
YRTKKPTDPLVKRVLRDFNEAKESNKELATMINSGLIIEMSPVEVLNLFRRIPDEDIPLL
GMNAKLTRPEHLILTRLPVPPLCIRPSVVSEIKAGTNEDDLTMKQSEILLINDVIARHIA
SGGKSELVQEDWDYLQLHAALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRQLVCNGPDVHPGA
NYVQQRGLKHKKYLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHRA
KVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDSFFTRDEAHQLATCLLSGPDTNMRIDMPTPAILKPRMLWTGK
QIFSLIMKPNKKCEVKANLETKGKNYTGNEDMCVQDSYVIIRNSELLCGSMDKSTLGSGT
KKSIFYILLRDWGEEYAVRGMWRLARMASYYMMNRGFSFGIIDVTPGKKLIDAKNKLLES
GYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNAMGEVVE
FRYGSDGLDPSYMEGKDRPVDLARVLADVRAKYLSRDEDPLDGDGIVLAAEETLALDDFK
TCTQEFKNELLTFLKSIATKVRNLRSRYSHCGPIVKQLQRLTLTQLVQFLRVCHHKYQRS
VIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNISTPII
TAELMQPLDQEFARRVKGRVEKTTLGEITTYIDEVYLPNECFLLIRLDAERIRLLCLEVN
VESIVYSICTSKLKIKPANIHIVSDWAIKVSAEPSKHGGWLNMSLQQLARQLPPVVVKGL
PQVSRAVIACDDTDSTVRYKLCVEGDGLRDVIATYGVDGRKTTSNNILEVYHTLGIEAAK
STIITEIQAVMEGHGMSVDRRHVELLAGQMTARGEVLGITRYGLARMKESVLNLASFEKT
ADHLFDAAYYGQTDCIEGVSESIILGVPAAIGTGVLQLMHAHPRPEPIVHRELLFDRPEY
HSSIWE
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaacaatatcgcgaaacttatgtggggagaaaaatttctcacgtaacgttt
aacgtggatagcgcgtctgctatccagcaggcagctcacatccaggtcataaccaagaac
ctgtacgctcaggatggacagcgagtgccagcgacatatggagtcctcgataggcggatg
ggtacaaatcagaaagatgccaactgtgagacctgtggcctggggctggcagagtgtgtg
ggccactacgggtacatagagctagccctccctgtcttccatgttggctacttcaggtcc
atcatcactatactgcagactatttgtaaggaatgcgcaaaagtgatgttagcggaaccg
ctcaaaaagtcatttagacgcaaattcatgaaccctgaactatcctacctacacaagaag
aacctccgtgctgctgtcctcaaaaaggctaagacttgtaccaagtgtccttactgtgaa
gctttgaacggtatggtgaagaagagtcccgctggtattctgaagattatccatgacaag
tataggactaagaagccaacggatccgcttgtgaagagggtgctgagagactttaatgag
gcgaaggagtctaataaggaattggccactatgattaatagtgggcttattattgagatg
agtcctgtagaggtactgaacctgttccgtcgcatcccggacgaggacatcccactcctg
ggcatgaacgcgaagctgacgcggcctgaacacttgatcctcacgcggctgccggtgccg
ccgctctgcatccggcccagtgtggtctccgagatcaaggctggcactaacgaagacgac
ttaacaatgaagcagtcagagattctcctcatcaacgacgtgatcgctcgccacatcgcc
agcggcggcaagagcgagctggtgcaggaggactgggactacctgcagctgcatgctgcg
ctgtacatcaacagcgagatgtctggcataccgctgtctatgcagcccaagaaaccaggc
cgaggtctggtgcagcggctgaagggcaaacagggtcgcttccgaggcaacttgtcgggg
aagcgagtggacttctccagcaggactgtcatctcaccagatcctaacctgcagattcag
gaggtgggagtaccagtccacgtagccaagatcctcacataccccgaacgggtgttcccg
gcgaacctgcagtggctacgtcagctggtctgcaacggacctgacgtgcatccgggggct
aactacgtgcagcaacgggggctgaaacataagaagtacctcaaatatggtaatagggag
aagattgctcaggagttgaagtgcggtgacatagtggaacgccacctggtggacggcgac
gtggtgctgttcaaccgacagccctcgctgcacaagctgtccatcatgtgccaccgcgcc
aaggtgcagccgcagaggaccttcaggttcaacgagtgcgtatgtactccgtacaacgct
gacttcgatggtgacgagatgaacatgcatctgccgcagacagaggaagccagagccgaa
gcacttattcttatggggaacaaatcaaacctcgtaactcctcgcaacggagaactcctc
atagcagccacccaggacttcatcaccggcgggtacctgatcacccagagggattccttc
ttcacccgcgacgaggctcaccagctcgccacctgcctcctgtcgggacctgacacgaat
atgaggatcgatatgccgaccccagctatactgaagcccaggatgctttggactgggaag
cagatatttagtttaataatgaaacctaataagaagtgtgaagtcaaggccaacttggag
actaaaggcaagaactacactggtaacgaggacatgtgtgtgcaggactcatatgtaata
ataaggaactcagaactcctgtgcgggtccatggacaagagtactctagggtctggcacc
aagaagagcatcttctacatcctgctgcgcgactggggcgaggagtatgccgtcagaggc
atgtggaggttagcgcgcatggcgtcgtactacatgatgaaccgcggcttcagcttcggc
atcatcgacgtcacgcccggcaagaagctcatcgacgccaagaataagctgctcgagtct
gggtactccaaatgcgatggctatatcctagagatggagaagggtaccctgcagtgccag
cctgggtgcaccatggaagagacactagaagctgtgatgctcagtgagctgagtagtatc
agagagttggcggctaaagcgtgtttccgcgagctgcaccctactaacgcgccgcttata
atggcacagagcggctccaaaggttcgaacatcaacatatctcagatgatcgcgtgcgtg
ggtcagcaggcgctgaacggcaagcgagtgcccaacggcttcgaagatcgatcgttacct
cacttcgagaggcattccaagatcccagcggcgcgtggtttcgtagagaacagcttctac
tcaggcctgacgcccacggagttcttcttccacaccatgggaggacgtgagggtctggtg
gacactgctgtcaagactgcagaaacggggtacctgcagcggagattggttaagtctcta
gaagacctggtcctgcactacgacatgacagtccgcaacgcgatgggggaggtggtggag
ttccgctacggcagcgacggactggacccctcctacatggagggcaaggaccgccccgtg
gacctcgccagggtcctcgctgatgttcgcgctaagtatctgtccagagatgaagaccca
ctagacggtgatgggatagtattagcagctgaagaaactctcgctttggacgacttcaag
acttgcacgcaggagttcaaaaatgaattactaacgttcctcaagtccatagcgacgaag
gtccgcaaccttcgcagccggtacagccactgcgggcccatagtgaagcagctacagcgg
ctgacactcacacagctggtgcagttcctccgagtgtgtcatcacaagtatcagaggagt
gttatcgagcctggtactgcggttggtgcgttggctgcacagagtataggggagcccggt
acccaaatgaccctgaaaaccttccacttcgccggcgtggcctccatgaacatcacgcaa
ggtgttcctcgcgtcaaggagatcatcaacgcctcccgcaatatctcgactcccatcatc
acggctgagctgatgcagccattggatcaggagtttgccagaagagtgaaggggagagtg
gagaagactacgcttggagagatcacaacatacatagacgaggtgtacttgcctaacgaa
tgcttcctgctgatccgcctcgacgccgagaggatacggctgctgtgtctagaagttaac
gtcgagtccatcgtctactcgatatgcacatcaaaactgaaaatcaagccggcaaacatc
cacatagtatcggactgggctatcaaagtatcagctgagcccagcaagcacggcggctgg
ctgaacatgtcgctgcagcagctcgcgaggcagctgccccctgtcgtcgtcaaggggctg
ccgcaggtgtcccgggctgttatcgcttgtgatgacactgacagcactgtcaggtacaag
ttatgcgtagaaggcgatggcttacgtgatgtgatcgctacttacggagtcgacggcaga
aagaccacttccaacaatatattagaggtgtaccacacactaggcatcgaggcagccaaa
tccaccatcataactgagatccaggcggtgatggaaggtcacggcatgagcgtggaccgg
cgccacgtggagctgctggcgggacagatgacggcgcggggggaggtcctgggcatcacg
cgctacggcctcgccaggatgaaggagtccgtgctcaacctggccagtttcgagaaaacc
gccgaccacctcttcgacgcagcctactacggccaaacggactgcatcgagggcgtctcc
gagtccatcatccttggagtaccagctgccatcggcaccggagtgctgcagctgatgcac
gcgcatcctcggcctgagcctatagtgcatcgggaactgctgttcgacagaccagagtat
cacagctctatatgggagtga
DBGET
integrated database retrieval system
