Idiomarina abyssalis: K5X84_10035
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Entry
K5X84_10035 CDS
T07548
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00730
Thiamine metabolism
iab01100
Metabolic pathways
iab01240
Biosynthesis of cofactors
iab04122
Sulfur relay system
Module
iab_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K5X84_10035 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
K5X84_10035 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iab03016
]
K5X84_10035 (thiI)
Enzymes [BR:
iab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
K5X84_10035 (thiI)
Transfer RNA biogenesis [BR:
iab03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K5X84_10035 (thiI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QZN90488
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All DBs
Position
complement(2071603..2073054)
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AA seq
483 aa
AA seq
DB search
MKFVVRLHAEITIKSRSVRKRYGKVLTNNLRKILAPIDDSVYAKWLWDRIEVSADGDDSE
VRNQIKEVLQNTPGISWFAEVIEQPLTDFDAIAELVGEHWLRRLPGKTFAMRVKRKGHHE
FNSQQLERYIGGYLLQRVPDASVNLSKPDLEIALQITNKVVHLVGERINGLGGFPIPTQE
TVLSLLSGGFDSGVATYEFIRRGARTHFCFFNLGGDAHEVAVRQIAYYLWKRYSASHPIK
FISVDFAPIVDDILTNVENGQMGVVLKRQMLRAADKVARYVKAQALVTGEAMGQVSSQTL
ANLRVIDQATDALVLRPLITKDKQEIVDEAKRIGTEPLAKSIPEYCGVISNKPTVKAIPA
VIEAEEAKLNKDLLDQVVQASNVLSMQDIATQTDKELELPDTTTELKSHTTIIDIRNDEE
IEAAPLSVDVEVIEIPFFKLATQFAELDQSREYLLYCDQGIMSRMQALLLHENGYSNVSV
YKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgttgttcgcctgcacgccgaaattaccattaaaagccgctctgtacgcaag
cgttacggtaaagtacttaccaataacctgcgtaaaattctggcgccaatcgatgactcg
gtttacgcaaagtggctgtgggaccgaattgaggtttcagccgatggcgatgattctgaa
gtacgtaatcaaatcaaagaagtcttacagaatacgccgggcatttcctggtttgcagag
gttatcgagcagccattaaccgactttgatgccattgcggaattagtgggcgaacactgg
ctacggcgcctgccgggtaaaacctttgctatgcgtgttaagcgcaaggggcatcacgag
tttaactcgcagcagctggagcgttacattggtggctatttgctgcaacgcgttcccgat
gcatccgttaacctttctaaacccgaccttgaaattgcactgcaaattacgaataaggtc
gtgcacctggttggagaacgtattaacggtttaggtggctttccaattcctactcaggaa
actgtattgtccttgcttagcggcggttttgattcaggcgttgcaacctatgagtttatc
cggcgcggtgcgcgaacgcacttctgcttctttaatttaggcggcgatgctcatgaagtg
gctgtgcgtcaaatagcctattacctctggaagcgttacagcgcttcgcatcccattaag
ttcatcagcgttgattttgcgcccattgttgatgacattcttaccaatgtggaaaacggg
caaatgggcgtggtattgaagcgtcaaatgctacgtgctgccgataaagttgcgcgctat
gtcaaagctcaggctttggtcaccggcgaggcgatggggcaagtttccagtcaaactctg
gctaatttgcgggttattgaccaggcaacggatgcgttagttttacggcctcttattacc
aaggacaaacaagaaattgttgatgaagccaagcgtattggcaccgagcctttggcaaaa
tcgattcccgaatactgtggggttatttcaaataagccaacggttaaagctattcctgcg
gttatcgaagccgaagaagcaaagcttaataaagatttactcgatcaagtggtgcaggcg
tcaaacgtactcagcatgcaggatatagcaactcaaactgataaagaactggagctgccg
gatacaaccacggaactcaaaagtcataccaccatcatagatattcgaaatgatgaagaa
attgaagctgcgcctttgtcggtagatgtagaggttattgagataccattttttaaatta
gccactcaatttgctgaattggatcaaagtcgtgaatacctgttgtattgtgatcagggc
attatgagccggatgcaggctttgttattgcacgaaaatggctatagcaacgtatcggtt
tataagccttaa
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