Idiomarina abyssalis: K5X84_11235
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Entry
K5X84_11235 CDS
T07548
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00860
Porphyrin metabolism
iab01100
Metabolic pathways
iab01110
Biosynthesis of secondary metabolites
iab01120
Microbial metabolism in diverse environments
iab01240
Biosynthesis of cofactors
Module
iab_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
K5X84_11235 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iab04147
]
K5X84_11235 (hemB)
Enzymes [BR:
iab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
K5X84_11235 (hemB)
Exosome [BR:
iab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
K5X84_11235 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QZN90706
LinkDB
All DBs
Position
complement(2335850..2336857)
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AA seq
335 aa
AA seq
DB search
MINQGAFPGRRLRRLRRHDFSRRLVAENQLSVDDLIYPMFVLEGDSQREQVSSMPGVERV
SIDLLLQECAELVGLGVPMVALFPVTPASAKSEMAEAAYDDNGLAQRAVKAIKAQFPELG
VMTDVALDPFTTHGQDGIIDDSGYVQNDITTDILVKQALSHARAGADVVAPSDMMDGRIG
AIRSALESEGFINTQIMAYSAKYASAFYGPFRDAVGSAGNLKGGNKKTYQMDPANSDEAL
QEIALDIQEGADMVMVKPGMPYLDIVRRVKDNFGVPTFAYQVSGEYAMLQAAITNGWLGQ
DVIEESLLSFKRAGADGILTYFAKTVAQHLAEKKR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgataaaccagggtgcttttccgggcagacgactgcgacgcttacgccgccatgacttt
agccggcggcttgtggcggaaaatcagttaagcgttgatgatctcatttatccgatgttt
gtactggaaggtgacagtcagcgcgaacaagtcagctccatgcctggtgttgaacgcgtc
agtatcgacttactgcttcaggaatgtgcagagctggtcggcctgggtgttcctatggtc
gcattattccccgttacgccggcatcggcaaagtcggaaatggcagaggctgcttatgac
gataacggattagcccagcgtgcagttaaagcgataaaagcgcagtttcctgaactgggt
gttatgaccgatgttgctctggatccattcacgactcatggccaggacggcattatcgat
gacagcggctatgtacagaacgatattactaccgatattctcgttaagcaggccttgtct
catgcgcgcgccggcgctgacgttgtggcgccgtcggatatgatggacggccgaattggt
gctattcgaagcgcgctggaatctgaaggttttattaatacacaaattatggcgtactcg
gctaaatatgccagtgcgttctacggtccgttccgcgatgctgtcggctctgcaggtaac
ctgaagggtggcaataaaaagacctatcagatggaccctgcaaactcagatgaagcccta
caggaaatagcattggatattcaggaaggcgctgacatggttatggtaaaaccgggtatg
ccttatttggatatcgtgcgccgggttaaagacaactttggggtaccaactttcgcttac
caggtgagcggcgaatacgccatgctacaggctgccattactaacggttggttaggtcag
gatgttattgaagagagtctgttaagctttaagcgtgcaggcgccgacggcattctcact
tattttgcaaaaacggttgcccaacacttagctgagaagaaacgttaa
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