Ignavibacterium album: IALB_3193
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Entry
IALB_3193 CDS
T01943
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ial
Ignavibacterium album
Pathway
ial00540
Lipopolysaccharide biosynthesis
ial01100
Metabolic pathways
ial01250
Biosynthesis of nucleotide sugars
Module
ial_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ial00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IALB_3193 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ial01005
]
IALB_3193 (rfaD)
Enzymes [BR:
ial01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IALB_3193 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ial01005
]
Core region
IALB_3193 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
LisH_2
Motif
Other DBs
NCBI-ProteinID:
AFH50896
UniProt:
I0API9
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All DBs
Position
3645679..3646653
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AA seq
324 aa
AA seq
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MIIVTGGAGFIGSAIVWRLNNLGNDKIIIVDELGTTDKWKNLVGLKFQEFIHKDDFISAI
VEDSIEFPVEAIIHMGANSSTTEKDADHLFSNNYLYTQELAKYCLSKNLRFIYASSAATY
GDGSLGFDDDESKLENLRPLNMYGYSKQLFDLWAKRNNVLDKIVGIKYFNVYGPNEYHKG
DMRSVVHKAFEQVRDTGKVRLFKSLNPQYKDGEQMRDFVYVKDAVDMTLHFLEHKNENGI
YNVGSGKARTWIDLVTALFNAVGKPVNIEFIDLPEHLREKYQYFTEANLSKIKKAGYNKS
ITSLEDGVTDYVKNYLLKNLYLGY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtaaccggcggcgcagggtttataggaagcgctattgtgtggagattaaat
aatctcgggaatgataagattattattgttgacgagctgggaacaactgataagtggaaa
aatcttgttggtttaaagtttcaggaattcattcacaaagatgattttattagtgctata
gttgaggactctatcgaatttcctgtcgaagcaattattcatatgggagctaattcatcc
actactgaaaaagatgcagatcatcttttttcgaacaactacctttatactcaggaactt
gccaaatactgtctatcgaagaatttaagatttatttatgcttcttctgcagctacttat
ggtgatggttctcttggatttgatgatgatgaatcaaaacttgaaaatcttcgtccctta
aatatgtacggctactcaaaacaattatttgatctttgggcaaaaagaaataatgttctt
gataaaatagttggaataaaatatttcaatgtttacggacctaatgaatatcacaaagga
gatatgcgttcagttgttcataaagcatttgaacaggtcagggatacaggaaaagttaga
ttatttaaatctttaaatccacaatataaagatggcgaacagatgcgtgactttgtttat
gttaaagatgccgttgatatgacattgcattttcttgaacacaaaaatgaaaacggaatt
tataatgttggttcgggaaaagcacgaacctggatagacctagtaactgctctgtttaat
gctgttggtaaacctgttaatattgagtttattgatttgccggaacatctacgggaaaag
tatcagtactttaccgaagctaatctttctaaaatcaaaaaggccggttataataaatca
attacttctttagaagatggagtaactgattatgttaagaattatttactgaaaaattta
tatctgggttactga
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