Iamia sp. SCSIO 61187: HC251_02150
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Entry
HC251_02150 CDS
T07394
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam00190
Oxidative phosphorylation
iam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
HC251_02150
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC251_02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iam03019
]
HC251_02150
Enzymes [BR:
iam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
HC251_02150
Messenger RNA biogenesis [BR:
iam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HC251_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QYG91353
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All DBs
Position
458062..460182
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AA seq
706 aa
AA seq
DB search
MSSAAVEPPEAGDAPPRYGPDDPERFINRELSWLDFNERVLALADDPTIPLLERAKFLAI
FSQNLDEFFQVRVAGLLDQVAAGIRHRTFDGRTPTAQVREVAARARILVDREERLFLEKI
APELAANGIVLSSWEELDDDDRVHMVGVFEDRIFPVLTPLAVDPGHPFPYISNLSLNLAL
TVRDPVTDERRFARVKVPSLLPRFVVMPDGERFVPLEQVIAAHLDQLFPGMVVEEHVAFR
VTRNADLTLEEEEADDLLAAVEMELRRRRFGRAVRLEVDARASSEVRELLMRELDVDEHA
TFDHVGPLDLGGLWAVHALDRPDLQDEPWPPVTPRRLSAPEGEKFDIFKAISDGDILVHH
PYDSFATSVEELIHRASRDPKVLAIKIALYRTSGDSPIVRSLIRAAERGKQVAALVELKA
RFDEANNIEWAKLLEEAGVHVTYGLLGLKTHSKVVLVVRDEPQGMMRYCHIGTGNYNSKT
ATLYEDLGLLTCSPALGADLTQLFNYLTGYGRNVRYRNLLVAPHTLRPGIVDLIQGEIEA
GPERGRIIMKMNSLVDPQMIDHLYEASRAGIEIDLIIRGICCLRPGIPGLSETIRVRSIV
GRYLEHSRIFWFANGADGAPLVAFGSADLMPRNLDRRVESTVTITDPVIEAQVREVLDVN
LADDTLAWTLSADGSWEPIKGEGSVHAHERFRAMALARTRRLEVED
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgccgccgtcgaaccccccgaggcgggtgacgcgccgccccggtacgggccc
gacgaccccgagcggttcatcaaccgcgagctgtcctggctcgacttcaacgaacgggtg
ctggccctggccgacgaccccacgatcccgctgctcgagcgggccaagttcctggccatc
ttcagccagaacctcgacgagttcttccaggtccgggtggccggcctgctcgaccaggtc
gccgccggcatccgccaccgcaccttcgacggccgcacgccgaccgcccaggtccgcgag
gtcgcggcccgggctcggatcctcgtcgaccgggaggagcgcctcttcctcgagaagatc
gcccccgagctggccgccaacggcatcgtgctctcgtcctgggaggagctcgacgacgac
gaccgcgtgcacatggtgggcgtgttcgaggaccgcatcttcccggtcctcaccccgctc
gccgtcgaccccggccacccgttcccctacatctccaacctgtcgctcaacctggccctg
acggtgcgcgaccccgtcaccgacgagcgccgcttcgcccgggtgaaggtgccgtcgctc
ctgccccggttcgtggtcatgcccgacggcgagcggttcgtgcccctggagcaggtgatc
gccgcccacctcgaccagctgttccccggcatggtcgtcgaggagcacgtcgcgttccgc
gtcacccgcaacgccgacctcaccctcgaggaggaggaggccgacgacctcctcgccgcc
gtcgagatggagctccggcgccggcgcttcggccgggccgtgcggctcgaggtcgacgcc
cgggcctcgtcggaggtccgcgagctgctgatgcgggagctcgacgtcgacgagcacgcc
accttcgaccacgtcggccccctggacctgggcggcctctgggccgtgcacgccctcgac
cggcccgacctccaggacgagccgtggcccccggtcaccccccgccggctctcggccccc
gagggcgagaagttcgacatcttcaaggccatctccgacggcgacatcctcgtccaccac
ccctacgactcgttcgccacctcggtcgaggagctgatccaccgggcgtcgcgggacccc
aaggtcctcgccatcaagatcgccctctaccgcacctcgggcgacagccccatcgtccgg
tcgctcatccgggccgccgagcggggcaagcaggtcgccgccctggtcgagctcaaggcc
cgcttcgacgaggccaacaacatcgagtgggccaagctcctggaggaggccggggtccac
gtcacctacggcctgctcgggctcaagacccactcgaaggtcgtcctcgtggtgcgcgac
gagccccaagggatgatgcggtactgccacatcggcaccggcaactacaacagcaagacg
gcgaccctctacgaggacctgggcctgctcacctgcagccccgccctcggcgccgacctg
acccagctgttcaactacctgaccggctacggccgcaacgtccgctaccggaacctgctg
gtcgccccgcacaccctgcgcccgggcatcgtcgacctcatccagggcgagatcgaggcc
ggtcccgagcggggccggatcatcatgaagatgaacagcctggtcgacccccagatgatc
gaccacctctacgaggcgtcccgggccgggatcgagatcgacctgatcatccggggcatc
tgctgcctccgccccgggatccccgggctgtcggagacgatccgggtgcggtcgatcgtg
ggccgctacctcgagcactcccggatcttctggttcgccaacggggccgacggcgccccg
ctggtcgccttcggctcggccgacctcatgccccgcaacctcgaccgccgggtcgagtcg
acggtcacgatcaccgacccggtgatcgaggcccaggtgcgcgaggtgctcgacgtgaac
ctggccgacgacaccctggcgtggaccctgagcgccgacgggtcgtgggagcccatcaag
ggcgagggctccgtccacgcccacgagcggttccgggccatggccctggcccgcacccgc
cgcctcgaggtcgaggactga
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