Ideonella dechloratans: LRM40_08685
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Entry
LRM40_08685 CDS
T07737
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
idc
Ideonella dechloratans
Pathway
idc00300
Lysine biosynthesis
idc01100
Metabolic pathways
idc01120
Microbial metabolism in diverse environments
idc01230
Biosynthesis of amino acids
Module
idc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRM40_08685 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
idc01002
]
LRM40_08685 (dapE)
Enzymes [BR:
idc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LRM40_08685 (dapE)
Peptidases and inhibitors [BR:
idc01002
]
Metallo peptidases
Family M20
LRM40_08685 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UFU11716
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All DBs
Position
complement(1858160..1859305)
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AA seq
381 aa
AA seq
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MSDTLRLVEDLIARPSVTPADHGCQDLIAQRLTALGFVAEHLPFGPEDFRVQNLWAVHDG
GRPGPTVVFAGHTDVVPPGPLALWNSDPFVPSHREGKLFGRGAADMKTSVAAMVVAAEEF
VRAHPTHTGRVAFLITSDEEGPSVDGTVKVVQALRERGERLDCCIVGEPTCVEKLGDMIK
NGRRGSLSGKLTVTGVQGHVAYPQLARNPVHEAAPALAQLAATEWDAGNEYFPPTTWQIS
NIHAGTGATNVIPGELVVDFNFRFSTASTPESLKARVAQVLDRHQLQWRIDWTLGGEPFL
TPVGSLVTALSEAIQAETGVRTELSTTGGTSDGRFIAKLCEQVVEFGPVNATIHKVNEHV
AVDSVEPLKNIYRRTLETLLA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccctgcgcctggtcgaagacctgatcgcccgcccttccgtcaccccggcc
gaccatggctgccaggacctgatcgcccagcggctcaccgccctgggcttcgtggccgag
cacctgcccttcggcccggaggacttccgcgtccagaacctctgggccgtgcacgatggc
ggccgccccggccccacggtggtcttcgccggccacaccgacgtggtgccccccggcccg
ctggccctctggaacagcgaccccttcgtacccagccaccgcgagggcaagctcttcggc
cgtggcgcggcggacatgaagacctcggtggccgccatggtggtggcggccgaggagttc
gtgcgggcccaccccacccacaccggccgtgtggccttcctgatcaccagcgacgaggaa
ggcccctcggtcgacggcaccgtcaaggtggtgcaggccctgcgcgagcggggcgagcgg
ctggactgctgcatcgtcggcgagcccacctgcgtcgaaaagctcggcgacatgatcaag
aacggtcgccgcggctcgctctcgggcaagctcaccgtcaccggtgtgcagggccatgtg
gcctacccgcagctggcgcgcaacccggtgcatgaagccgccccggcactggcccagctg
gccgccaccgaatgggatgccggcaacgagtacttcccgcccaccacctggcagatctcc
aacatccatgccggcaccggtgccaccaacgtgattccgggcgagctggtggtggacttc
aacttccgcttctccaccgcctccacgcccgaaagcctgaaggcccgggtggcccaggtg
ctggaccgccaccagctgcagtggcgcatcgactggacgctgggcggcgagcccttcctg
accccggtgggcagcctggtcaccgcgctgagcgaagccatccaggcggagaccggtgtg
aggaccgagctctccaccaccggcggcacctccgacggccgcttcattgccaagctgtgc
gaacaggtggtggaattcggtccggtgaacgccaccatccacaaagtcaacgagcatgtg
gccgtggacagcgtggagccgctgaagaacatctaccgccgcaccctggaaaccctgctg
gcctga
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