Ideonella dechloratans: LRM40_10070
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Entry
LRM40_10070 CDS
T07737
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
idc
Ideonella dechloratans
Pathway
idc00260
Glycine, serine and threonine metabolism
idc00630
Glyoxylate and dicarboxylate metabolism
idc00785
Lipoic acid metabolism
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01200
Carbon metabolism
Module
idc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRM40_10070 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRM40_10070 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LRM40_10070 (gcvP)
Enzymes [BR:
idc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LRM40_10070 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UFU08684
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All DBs
Position
2160994..2163930
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AA seq
978 aa
AA seq
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MLTSAHAPLAALENATAFASRHIGPGADDEATMLAAIGPASRRALIEAIVPAAIARTAAM
DLPAPATEEQALAELKAIAGKNQRLRSFIGQGYHGTFTPGVILRNILENPAWYTAYTPYQ
AEISQGRMEALVNFQTMVTDLTGMAIANASMLDEATAAAEAMTLARRSVKAKGHTLVVSG
DTHPQIIEVLQTRAKPLGLTIQLANSAEEWTAALAGDDYFAALAQYPASSGWLHDWSADA
ATVKGKQAAFILAADLLALTVLKSPGEMGADIVLGSTQRFGMPMGAGGPHAAYLACRDEF
KRSLPGRLVGISVDSHGNPAYRLALQTREQHIRREKATSNICTAQVLPAVVASMYAVYHG
PQGLTRIALRVARYLGILVAGLKQLGVDMSQTHHLDAGAFDTVCLHTGERTAALMARAVS
LGANLRSPWPGYLSITLDETTTREDLALLWRIFAAEGQALPSVDELSLTGDLIPPALRRT
SAFLTHPVFNSHHSETEMLRYIRKLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEF
AEVHPFAPADQLAGYAELNAQLCGWLEQATGYAGVSLQPNAGSQGEYAGLLAICAWHASR
GEGHRNICLIPESAHGTNPASAMMAGLQVVVVKCDANGSVDLGDLKAKCEQHAANLACIM
ITYPSTYGVYDLQVKELCAMVHQYGGRVYVDGANMNALVGVAAPGQFGGDVSHLNLHKTF
CIPHGGGGPGVGPVCVVEDLVPFLPGHATAGQLREGGVGAVSAAPYGNAAVLPISWMYVR
MMGTAGLTAATETAILNANYVAARLADHYDIHFSGNVAGVKGGGVAHECILDLRPLKDSS
GVSAEDVAKRLIDYGFHAPTLSFPVAGTLMVEPTESEPLFELDRFCDAMIAIREEIRLVE
AGAWPREDNPLKNAPHTAASLLSGEWTHPYSREVAAYPVASLKQVKYWSPVGRVDNVYGD
RNLFCSCLPVSAYGDTPA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctgacttccgcccacgcccctctggccgcgcttgagaacgccacggccttcgcctcc
cgccacatcgggccgggggccgacgacgaagccaccatgctggcagccatcggcccggcc
tcgcgccgcgcgctgatcgaggccatcgtgcccgctgccatcgcccgcaccgcggcgatg
gacctgcccgccccggccaccgaggaacaggccctggccgagctcaaggccatcgccggc
aagaaccagcggctgcgcagtttcatcggccagggctaccacggcaccttcacgccgggc
gtcatcctgcgcaacatcctcgagaaccccgcgtggtacaccgcctacacgccctaccag
gccgagatctcccagggccgcatggaggcgctggtcaacttccagaccatggtgaccgac
ctcaccggcatggccatcgccaacgcctccatgctggacgaggccaccgccgccgccgaa
gccatgaccctggcgcgccgcagcgtcaaggccaagggccacaccctggtcgtctcgggt
gacacgcacccgcagatcatcgaggtgctgcagacccgcgccaagccgctgggcctgacc
atccagctggccaactcggccgaggaatggaccgccgccctggccggtgacgactacttc
gccgcgctggcccagtacccggccagcagcggctggctgcacgactggtcggccgacgcc
gccaccgtcaagggtaagcaggccgccttcatcctggcggccgatctgctggccctgacc
gtgctgaagagccccggcgagatgggcgccgacatcgtgctgggcagcacccagcgcttc
ggcatgcccatgggggctggcggcccgcacgccgcctacctcgcctgccgcgacgaattc
aagcgcagcctgcccggccgcctggtgggcatcagcgtggacagccacggcaacccggcc
taccgcctggccctgcagacccgcgagcagcacatccggcgcgagaaggccacctccaac
atctgcacggcccaggtgctgccggccgtcgtggccagcatgtacgccgtctaccacggc
ccgcagggcctgacccgcatcgccctgcgcgtggcgcgctacctgggcatcctggtggcc
ggcctgaagcagctgggcgtggacatgagccagacccaccacctggacgccggggccttc
gacaccgtctgcctgcacaccggcgagcgcaccgccgccctgatggcccgcgccgtcagc
ctgggtgccaacctgcgcagcccctggccgggctacctcagcatcacgctggacgagacc
accacccgcgaggacctggccctgctgtggcgcatcttcgcggccgaaggccaggccctg
cccagcgtggacgagctgagcctgaccggcgacctgatcccgccggccctgcgccgcacc
agcgccttcctgacgcacccggtcttcaacagccaccacagcgaaaccgagatgctgcgc
tacatccgcaagctctcggacaaggacctggcgctggaccgcagcatgatcccgctgggc
tcctgcaccatgaagctcaacgcgaccagcgagatgatccccatcacctggcccgagttc
gccgaggtgcaccccttcgccccggccgatcagctggccggctatgccgagctcaacgcc
cagctctgcggctggctggaacaggccaccggctatgccggcgtcagcctgcagcccaat
gccggttcgcagggcgagtacgccggtctgctggcgatctgcgcctggcacgccagccgc
ggcgaaggccaccgcaacatctgcctgatcccggaaagcgcccacggcaccaacccggcc
agcgcgatgatggccggcctgcaggtcgtcgtcgtcaagtgcgatgccaacggcagcgtg
gacctgggcgacctgaaggccaagtgcgagcagcatgccgccaacctggcctgcatcatg
atcacctacccctccacctacggcgtctacgacctgcaggtgaaggagctctgcgccatg
gtccaccagtacggcggccgggtgtacgtggacggcgccaacatgaacgccctggtgggt
gtggccgcgcccggccagttcggcggtgacgtgagccacctgaacctgcacaagaccttc
tgcatcccgcacggcggtggcggcccgggcgtcggccccgtctgcgtggtggaggacctg
gtgcccttcctgcccggccatgccacggcaggccagctgcgcgaaggtggcgtcggcgcc
gtcagcgccgcaccctatggcaatgccgccgtgctgccgatcagctggatgtatgtgcgc
atgatgggcacggccggcctgaccgccgccaccgagaccgccatcctgaacgccaactac
gtggccgcccgcctggccgaccactacgacatccacttcagcggcaacgtggccggcgtg
aagggcggcggcgtggcccacgagtgcatcctggacctgcgcccgctgaaggacagcagc
ggcgtgagcgccgaggacgtggccaagcgcctgatcgactacggcttccacgccccgacg
ctgagcttcccggtggccggcacgctgatggtggagcccaccgaaagcgaacccctgttc
gagctggaccgcttctgcgacgcgatgatcgccatccgcgaggagatccgcctggtcgaa
gccggtgcctggccgcgcgaggacaacccgctgaagaacgcgccgcacaccgccgccagc
ctgctcagcggcgaatggacgcacccgtacagccgcgaggtggccgcctacccggtggcc
agcctcaagcaggtgaagtactggtcgccggtgggccgcgtggacaacgtctacggcgac
cgcaacctgttctgcagctgcctgccggtgagcgcctacggcgacaccccggcctga
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