Ideonella dechloratans: LRM40_12435
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Entry
LRM40_12435 CDS
T07737
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idc03016
]
LRM40_12435 (mnmC)
Enzymes [BR:
idc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LRM40_12435 (mnmC)
Transfer RNA biogenesis [BR:
idc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LRM40_12435 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
FAD_binding_2
Pyr_redox_2
Thi4
Shikimate_DH
Amino_oxidase
AlaDh_PNT_C
Pyr_redox
GIDA
HI0933_like
3HCDH_N
2-Hacid_dh_C
NAD_binding_2
TrkA_N
Pyr_redox_3
NAD_binding_7
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UFU09113
LinkDB
All DBs
Position
2658802..2660856
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AA seq
684 aa
AA seq
DB search
MKTQAIVEAQIDFDHPGHDGLAWAPGFQDVYHARDGAFAQARHVFLRGNGLPGRWQGRGR
FAILETGFGLGNNFLATWAAWRDDPQRCERLVFVSMEKHPPRREDLARAHATSPAPALAA
QLLAQWPPATPDLHVLDFEGGRVRLLLALGDVATWWPELSGQIDACYLDGFAPAQNPAMW
DAHLLRHATRLGAPDLTAATWSIARVVRDGLQGAGFALERAPGFGSKRDMLVARRHPLPA
QALARGIPPGRQAAPQARTALVIGAGLAGAAAARALAAQGLSVTVLERHVAPAQETSGNR
AGLFHGVAHAHDGAHAQLLRAAALRAHQLIAPLVASGQVAGNPNGLWRGGGEPADWAQLQ
AAVQAQGLPAAYLRPLSRDEAVEPLGLAPAGPGWWYPQGGWACPADLVRAWLDSPGVRVL
GQQDVQALAPREGGGWRALCAAEANGPGAMLAEADVVVVAGAADGLALLRPWTGVDDWPR
VRSRGQVSCLSAELAAALQLPAPRHPLASGGYGIGLPPEAGGGLLCGATSQPGDEDPALR
LSDHLSNVGQWDRLLGRSPDAGEQARREALLATAMAQGALTGRVGWRLACDDRLPLVGPV
PLPAAQRTGLTRQEQPRRVPRVPGLYVLSALGSRGITLAPLLGEVLAAWITGAPVPLASS
LMDAIDPARFIARAARAASRTAAD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccaagccatcgtcgaagcgcagatcgacttcgaccatcccggccacgacggc
ctggcctgggcgccgggcttccaggacgtctaccacgcccgcgacggcgccttcgcccag
gcgcggcacgtcttcctgcggggcaatggcctgcccgggcgctggcagggccgtggccgc
ttcgccatcctggaaaccggcttcggcctgggcaacaacttcctggccacctgggccgcc
tggcgtgacgacccgcagcgctgcgagcgcctggtcttcgtgtcgatggagaagcacccg
ccccggcgcgaggacctggcccgcgcccatgccaccagcccggcccccgcgctggcggcc
caactgctggcccaatggccgccggccacgccggacctgcatgtgctggacttcgagggc
ggccgggtgcgcctgctgctggccctgggcgatgtggccacctggtggcccgagctgagc
ggccagatcgacgcctgctacctggacggcttcgcccccgcgcagaacccggccatgtgg
gacgcccacctgctgcgccacgccacccgtctgggcgccccggacctcaccgccgccacc
tggagcatcgcccgcgtggtgcgcgacggcctgcagggcgccggcttcgccctggagcgg
gcgcccggcttcggcagcaagcgcgacatgctggtggcccgccgccaccccttgccggcc
caggccctggcgcgcggtatcccgccgggccgccaggcggccccgcaggcccgcactgcc
ctggtcatcggcgccggcctggccggggccgccgccgcccgggccctggccgcgcagggc
ctgtcggtgaccgtgctggagcgccacgtcgcccccgcccaggaaacctcgggcaaccgg
gccggcctgttccacggcgtggctcacgcccacgatggcgcccacgcccagctgctgcgc
gcggccgccctgcgcgcgcaccagctcatcgcccccctggtggccagcggccaggtggcg
ggcaacccgaacggcctgtggcgcggcggtggcgaaccggccgactgggcccagttgcag
gcggccgtgcaggcccaggggctgcccgccgcctacctgcggccgctctcccgcgacgag
gcggtcgaaccgttgggcctggccccggcaggccccggctggtggtacccgcaaggcggc
tgggcctgtccggccgatctggtgcgggcctggctggacagccctggcgtgagggtgctc
ggccagcaggatgtgcaagccctcgccccgcgcgaaggcggcggctggcgggccctgtgc
gccgccgaggcgaacggccccggcgccatgctggccgaagccgatgtggtggtggtggcc
ggggcggccgacgggctggccctgctgcgcccctggaccggggtggatgactggccccgg
gtgcgcagccgcggccaagtcagctgcctgtcggccgaactggcggccgcgctgcaactg
cccgcgccgcggcacccgctggccagcggcggctacggcatcggcctgccgcccgaggcc
ggcggcggcctgctgtgcggcgccaccagccagcccggcgacgaggacccggccctgcgc
ctgagcgaccatctgagcaatgtggggcagtgggaccgtctgctgggtcgcagcccggac
gccggagagcaagcccggcgcgaggccctgctggccacggccatggcacaaggcgcgctg
accggccgcgttggttggcgcctggcctgcgacgaccggctgcccctggtcggcccggtg
ccgctgccggcggcccagcggacaggcctcacacggcaggagcagccccgcagggtgccg
cgggtgccgggcctttatgtgctgagcgccctgggctcgcgcggcatcacgctggcgcct
ctgctgggcgaggtgctggccgcctggatcaccggcgccccggtgccgctggcgtccagc
ctgatggatgcgatcgacccggcgcgcttcatcgcgcgggcggcacgggccgccagccgc
acggcggccgactga
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