Idiomarina sp. OT37-5b: C5610_03885
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Entry
C5610_03885 CDS
T05379
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt00071
Fatty acid degradation
idt00280
Valine, leucine and isoleucine degradation
idt00310
Lysine degradation
idt00362
Benzoate degradation
idt00380
Tryptophan metabolism
idt00410
beta-Alanine metabolism
idt00640
Propanoate metabolism
idt00650
Butanoate metabolism
idt00907
Pinene, camphor and geraniol degradation
idt00930
Caprolactam degradation
idt01100
Metabolic pathways
idt01110
Biosynthesis of secondary metabolites
idt01120
Microbial metabolism in diverse environments
idt01200
Carbon metabolism
idt01212
Fatty acid metabolism
Module
idt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C5610_03885
00650 Butanoate metabolism
C5610_03885
09103 Lipid metabolism
00071 Fatty acid degradation
C5610_03885
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C5610_03885
00310 Lysine degradation
C5610_03885
00380 Tryptophan metabolism
C5610_03885
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C5610_03885
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C5610_03885
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C5610_03885
00930 Caprolactam degradation
C5610_03885
Enzymes [BR:
idt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C5610_03885
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C5610_03885
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C5610_03885
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
AVJ55518
UniProt:
A0A2S0IJ37
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All DBs
Position
862594..864717
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AA seq
707 aa
AA seq
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MSEQKAFSLDIKDNGVAVITIDVPGESMNTLKDTFADEVGRLMNRLEGDSDIKGVVFISG
KPGSFIAGADINMINDCETAADAESLARKGQAMFDRIEQLEVPVVAAINGACLGGGLELA
MACHVRVCSDNPKTQLGLPEVQLGLLPGSGGTQRLPQLVGVQQGITMMLTGKQLRAKQAL
KAGLVDEVVPQSILLDAAMKHALSAKPKKKKAPLKGIIKVLEATAYGRNIIYKKAAEQAQ
KKAQGNYPAIDKIIDTVRIGVEKGREAGLDKEARSFGELAMTPQSYQLRQIFFATTEMKK
ETGADGVKPAEIHRVGVLGGGLMGGGIAYVTAAKAGLPARIKDISHEGITHALHYSYERL
NKKVKRKHMRRAELEKTMLSLSGTLDYSGFERVDVVIEAVFEDLELKQKMVADIEQYAKP
ETIFATNTSSLPITQIAAKAQRPQNVIGLHYFSPVDKMPLAEIITHEGTSPETIATTVAL
AKKQGKTPIVVKDGAGFFVNRILAPYMNEAARLVLAGEPIEHVDKALVKFGFPVGPITLL
DEVGIDVGAKVAAILRKELGERFEPPAAFDKLIDDERKGKKNQKGFYQYGKGVKGKPVDS
SVYSLLGIEPKQNLDREAVAELCVLPMLNEAAYCLQEGIIRSARDGDIGSVFGIGFPPFR
GGPFRYMDEIGIGALVAKLKTLAEQRGDRYQPAPLLVEMAEQQRRFY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagaaagccttctcactggacataaaggacaacggcgttgcggtgatcacc
attgatgtgccgggcgagtcaatgaacaccctcaaggataccttcgcggacgaagtcggg
cgactcatgaaccggctggagggcgattcggacatcaagggcgtggtgtttatcagtggt
aagccgggttcctttattgccggcgctgacatcaacatgatcaacgattgtgaaaccgct
gccgatgccgaaagtctggcccgcaaggggcaggccatgtttgatcgcatcgagcagctg
gaagtaccggtcgtcgcggccatcaacggtgcctgcctgggtggcggtctggaactggcg
atggcctgtcatgtccgggtttgttcggataatccgaaaacacaactgggtttaccggaa
gtgcaactgggtttactgcccggttccggcggaacgcaacggttgccgcaattagtcggt
gttcagcagggcatcaccatgatgctgaccggtaagcaattacgggcgaaacaggcgctg
aaagccgggttggtggatgaagtcgtgcctcagtcgattttgctcgacgcggcgatgaaa
cacgcgttgtcggctaagccgaaaaagaaaaaagcgcccctgaaaggcatcattaaagtg
ctggaagctaccgcttatgggcgtaatattatttacaagaaagcggctgaacaggcacag
aagaaagcgcaggggaattatccggcgatcgataagatcatcgataccgtgcgtattggt
gttgaaaaaggccgtgaagctggactggacaaagaagcacgcagctttggtgaactggcg
atgacaccgcagtcgtaccagttgcgacaaatcttttttgccaccaccgagatgaaaaaa
gaaaccggtgctgacggtgttaagccggcggagattcatcgcgttggtgtgcttggcggc
ggtctgatgggcggcggtattgcttacgtgacggcggctaaagcgggtttgccggcacgc
attaaagacatctcccacgaaggcatcactcatgcactgcactacagttatgagcgtttg
aacaaaaaagtaaaacgcaaacacatgcgccgtgcggaactggaaaaaaccatgttgtca
ttaagcggcaccctggattattccggtttcgaacgggtggatgtggtgattgaagcggtg
tttgaggatctggaattgaagcaaaaaatggtggctgacattgagcagtacgccaagccg
gaaaccatttttgcgaccaataccagttcgttgccgattacccagattgcggcgaaagcg
cagcgtccacaaaatgtgattggtctgcattacttctcaccggtggataaaatgccgttg
gcagaaattattacccatgaggggacctcaccggaaaccatcgcgacgaccgtcgcgctt
gccaagaaacaaggcaaaacgccgattgtggttaaggacggcgccggtttctttgttaac
cggattctggctccttacatgaacgaagctgcacgactggtgcttgccggtgagcctatc
gagcacgtcgacaaagcgctggtgaagtttggcttcccggtcgggccgattacgctgctg
gatgaagtgggtattgatgtcggtgcgaaagtggcggcaattttgcgcaaagagctgggt
gagcgttttgaacctccggcggcttttgacaagctgattgacgatgagcgcaaaggcaaa
aagaaccagaaaggtttttatcaatacggtaaaggggtaaaaggtaagccggtcgacagt
tcggtgtattcgttgttaggcattgagccgaaacaaaaccttgaccgcgaagccgtggcg
gaactctgtgtgttgccgatgttgaatgaggcggcctactgtctgcaggaaggcattatt
cgcagtgcccgcgacggcgatatcggctcagtgtttggtatcggcttcccgccgttccgt
ggcggtccattccgttatatggatgagattggcattggtgcgctggttgccaaactgaag
accctggcagaacagcgcggtgatcgttatcaaccggcaccactgctggtggaaatggcc
gaacagcaacgtcgcttttactaa
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