Idiomarina sp. OT37-5b: C5610_11060
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Entry
C5610_11060 CDS
T05379
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt00730
Thiamine metabolism
idt01100
Metabolic pathways
idt01240
Biosynthesis of cofactors
idt04122
Sulfur relay system
Module
idt_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C5610_11060
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C5610_11060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idt03016
]
C5610_11060
Enzymes [BR:
idt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C5610_11060
Transfer RNA biogenesis [BR:
idt03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C5610_11060
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVJ57392
UniProt:
A0A2S0IPG8
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Position
complement(2335680..2337146)
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AA seq
488 aa
AA seq
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MKFVARLHAEITIKSRTVRKRHGKVLTNNLRKVLARDDADVYVKWLWDRIEVTATAHAGA
SSTDVRRTISEGLACTPGISWFAEVEERELSDFDSIATWVGAHWIEQLHGKSFAVRVKRK
GHHDFNSQQLERYLGGYLLKQTQGSRVQLKDADVEIPIQITDNIVHLVGKRQQGLGGFPI
PTQETVVSLMSGGFDSSVASFEFIRRGARTHFCFFNLGGDAHEVAVRQISHYLWQRYSSS
HPIKFVSIDFAPVVEDILTHCDNGLMGVVLKRQMLRAAERVARYLKAQALVTGEAIGQVS
SQTLSNLRVIDAATDAVVLRPLITRDKQEIVDIAKQIGTEPLAKSIPEYCGVISVKPTVR
APVDDVHAEEAKLDMSLLKRVVDDAQVLSMADIAAQAAEKTELQPSAVEEGTERVIIDIR
NQDEIDEQPLSVDLQVKEIPFFKLQSEFVKLDASTHYLLYCSQGVMSKMQALLLQESGHT
NVSVYKPE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcgcacgcttacacgcagaaatcaccattaaaagccgcacggtgcgaaaa
cgccacggcaaggttctaacgaataatctgcgcaaggtgttggcccgggacgatgccgat
gtttatgtaaagtggctttgggatcgcatcgaagtgacggccaccgcacacgctggcgca
tcctcaaccgacgtgcgtcgcaccatttcagagggactcgcttgcactccggggatttca
tggttcgccgaagttgaggaacgcgaactcagtgattttgacagcatcgccacttgggtc
ggtgcacattggattgaacagttgcatggtaagagttttgcggttcgggtaaagcgcaaa
ggccaccatgactttaactcacagcaactggaaagatacctgggaggttatttattaaaa
cagacccagggcagtcgggtgcagctgaaggatgctgacgttgaaatcccgattcaaatc
accgataacattgtgcacttagtcggtaaacggcagcagggcttaggcggtttcccaatt
ccaacgcaggaaaccgtagtcagcctgatgagcggaggtttcgactccagtgttgccagc
tttgaatttatccggcgcggcgctcgtacccatttttgtttctttaatcttggcggcgac
gcgcacgaagtcgcagtaaggcaaatcagccattacctctggcaacgctatagctcttct
cacccgatcaaatttgtgagtattgattttgcgccggtagtcgaggatattctgacccac
tgcgataacggtcttatgggcgtggtattaaagcgacaaatgctaagagctgcagagcgg
gtagcccgttatctaaaagcgcaggcattggtgaccggagaggcgatcggccaggtgtcg
agccagacgttgtcaaacttacgggttattgatgccgcaacggatgcggtggtacttcgg
ccgctgattacccgtgataagcaagagatcgtcgatattgccaagcaaattggtaccgag
ccattggctaaatcgatcccggagtattgcggggtgatttctgttaagccgaccgtgcgg
gcgcctgtcgatgatgtgcatgcggaagaagctaagctggacatgagtttactgaagcgt
gttgtcgatgacgcacaggtattgagtatggccgatatcgccgcgcaggcagcagagaag
acagagctgcaaccgagtgcggttgaagagggcacggaacgggtgattatcgacatccgc
aatcaggacgaaattgatgagcagccgttatccgttgatctgcaggttaaggaaattccg
ttttttaaactgcagtcagaatttgtaaaacttgatgccagcacgcattacctgttgtat
tgttcgcagggcgtgatgagtaagatgcaggcgttgctgttgcaagagtctggtcatacc
aatgtttcggtctataaacctgagtaa
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