Ischnura elegans (blue-tailed damselfly): 124157312
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Entry
124157312 CDS
T09104
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124157312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iel03019
]
124157312
Enzymes [BR:
iel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
124157312
Messenger RNA biogenesis [BR:
iel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
124157312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
AAA_16
AAA_22
TniB
MMR_HSR1
ATP_bind_1
AAA_10
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124157312
NCBI-ProteinID:
XP_046387891
LinkDB
All DBs
Position
4:40297052..40307222
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AA seq
424 aa
AA seq
DB search
MSEEKDKDSNVQEFKLEPDTELRFEVESKHEVSLELKTGMAEVFGTELVKGKAYVFTSGA
KIAVFTWQGCTVELKGKTDVVYIAKETPMIMYLNAHAALEQLRRKAEGEGGRGPIAMVVG
PTDVGKSTICRLLLNYAVRMGRRPVFVDLDVGQGQISVPGTIGALLVERPATVEEGFSQQ
APLVYHYGHKSPGNNPALYNMLVSRLAEVIQERMSSNRKANASGVIINTCGWVKGDGYRQ
LTHVAQAFEVDVILVLDQERLFNELVRDMPSFVKVVFLPKSGGVVERSQATRAEARDSRV
KEYFYGLRSRLYPHSFDVRFSDVRVCKIGAPSLPDSCMPLGMKAEDNMTKLVSVTPGTNL
LHHLLAVSFAASLDEDVIQSNVAGFVCVTNVDMERQLMTVLSPQPRPLPKTLLLLSDIQF
MDSH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaaaggacaaagattctaatgttcaagagtttaagttggagcccgataca
gaattaagattcgaggttgagtcaaagcatgaagtctcgttagagttgaaaacgggaatg
gcagaagtgttcgggactgaattagttaaagggaaagcctatgtgttcacgtctggagca
aaaatcgctgtatttacatggcagggttgtacagttgagctgaaaggaaaaacggatgtt
gtgtacatagccaaggaaacaccaatgatcatgtacttaaatgctcatgcagctttggag
caattgagacgaaaagctgaaggagaaggtggacgtggtcctatcgctatggtagttgga
cctactgatgttggaaaatctacaatatgtaggctgcttttaaattatgctgtaagaatg
ggaagaagaccagtttttgttgaccttgatgtaggacagggccaaatatctgtcccagga
actataggagctctcctggtggaaagacctgcaacagtggaggaaggattttctcaacaa
gctcctttggtttaccattatggccacaagtctcctggaaacaatcctgccctttataat
atgctagtctcaaggctagctgaagtcatacaggagagaatgagctctaatcgaaaagct
aatgcgtctggtgtgatcatcaatacctgtggctgggtgaaaggagatggttaccggcaa
ttaacgcatgttgctcaggcgtttgaagttgatgttattctagtgttggaccaggagcga
ctttttaatgaattggtgcgagatatgccttcatttgtgaaagttgtatttctcccaaag
agtggtggggtagtggaacgtagtcaagcaacacgtgcggaggctagagattcgcgagtg
aaggagtatttttatggcttaaggtctcggctctacccacattctttcgatgtgagattc
tctgatgtcagagtgtgcaaaattggtgctccatccttgccagactcttgtatgcccctg
gggatgaaagctgaagataacatgaccaaactggtgtcagttactcctggtacaaatctc
ctccatcacctgctagcagtgagttttgctgcttcactggatgaagatgtgatacaaagc
aatgttgctggatttgtttgtgtgaccaacgtggacatggaaaggcagctcatgactgtt
ctctcacctcaaccacgaccgcttcctaaaacacttcttcttttatcagatatccagttc
atggatagccattaa
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