Ischnura elegans (blue-tailed damselfly): 124164531
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Entry
124164531 CDS
T09104
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03020
RNA polymerase
iel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124164531
09124 Replication and repair
03420 Nucleotide excision repair
124164531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iel03021
]
124164531
03400 DNA repair and recombination proteins [BR:
iel03400
]
124164531
Enzymes [BR:
iel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124164531
Transcription machinery [BR:
iel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124164531
DNA repair and recombination proteins [BR:
iel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124164531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
124164531
NCBI-ProteinID:
XP_046397846
LinkDB
All DBs
Position
8:complement(96375556..96399577)
Genome browser
AA seq
1941 aa
AA seq
DB search
MALCTDSKAPIRTVKRVQFGIISPDEIRRMSVTDGGIRFSETMEGGRPKLGGLMDPRQGV
IDRLSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPNNP
KIKEIVMKSKGQPRKRLTFVYDLCKGKNICEGGDEMDIQKDGVDDPGGGQQNRKAGHGGC
GRYQPSIRRAGLDLTAEWKHVNEDSQEKKIALSAERVWEIFKHITDEECFIMGMDPKYAR
PDWMIVTVLPVPPLSVRPAVVMYGSARNQDDLTHKLSDIIKANNELLRNEQAGAAAHVLS
ENIKMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSAR
TVITPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNG
ERIDLRFHPKPSDLHLQCGYRVERHVRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRM
NLSVTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTA
VRKMTKRDVFLEKEQMMNILMHLPIWDGKMPQPAILKPKPLWTGKQVFSLIIPGNVNMIR
THSTHPDDEDDGPYSWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEV
CGRFYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNME
LEPTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQV
IACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGR
EGLIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQ
NLPTIKLSNKAFERKFKFDPTNERNLRRVFTEDILREVSGGSSDIIGALEREWEQLVRDR
EALRQIFPSGDSKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVQDLLMKCVIV
AGEDALSKQANQNATLLFQCLVRSTLCTKCVSEDFRLSSEAFEWLIGEIETRFQQAQCQP
GEMVGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL
TGAAARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVISEDQEFVNVYYEMPDFD
PTRISPWLLRIELDRKRMTDKKLTMEQIAEKINTGFGDDLNCIFNDDNAERLVLRIRIMS
SDENKFGGGAGGDEEDSVDKMEDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKK
RIVVTESGEFKAIAEWLLETDGTSLMRVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSV
EKEMNTVLQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDV
LMDAASHAEVDPMRGVSENIIMGQLPRLGTGAFDLLLDAEKCRGGIEIPVMLGAGMMLGT
GGMMFANAATPTSSPYRTPWMVSSSPDYRNMSWSPGMGSGRTPGGPSFSPSGSSDASGLS
PGYAGSGWSPQPGSPSSPGLPSSIYIPSPSSSSIGIGAGMSPSYSPSSPVFAPAASSRSP
PSPTYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPSSPTYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPASPSYSPSSPKYSPTSPSY
SPTSPSYGGSPQYTPVSPQYSPTSPTYSPTSPSYLATQGGSSERRSKGKTATGPATRYSP
TSPNFSPNSPSYSPSSPQYSPSSSKYSPTSPTYTPTSPKYSPTSPTYSPTGGPGQQGVPG
YSPTSPTYSPSSPAYDDSDKN
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtgtacagattctaaagctccaattcggacggtgaaacgtgtccagtttggt
attataagtcctgatgaaattcggcgtatgtcagtcactgatggtgggattagattctca
gaaaccatggagggagggcggcctaaacttggaggccttatggatccccgtcaaggggtt
attgatcgactttcacgatgccaaacttgcgctggaaacatgacagaatgcccgggacac
ttcgggcacattgatttggcaaaacctgttttccacattggatttataaccaaaactatt
aagattttgcggtgtgtttgcttttactgttcgaaattgcttgtgagcccgaataaccca
aaaattaaagaaattgtaatgaaatctaaaggtcagcctaggaagcggctcacttttgtg
tatgacctgtgcaagggtaaaaatatctgtgaaggtggtgatgaaatggacattcagaag
gatggcgttgatgatcctggaggtggtcagcagaatcgaaaggctggacacggaggttgt
ggtcgttaccagccaagcatcaggcgagctggtctagatcttacagctgagtggaaacat
gtgaatgaggattcacaagaaaagaaaattgccctcagtgcagagagggtttgggaaatc
ttcaagcacatcactgatgaggaatgtttcattatgggcatggacccaaagtatgctcgt
cctgattggatgatagtgacagtacttccagtaccaccactgtcagtaagaccagcagta
gtaatgtacggctctgctaggaatcaggatgatttgactcataagctttcagatataatt
aaagctaataatgagttactccgcaatgagcaagcaggtgcggcagctcatgtactctct
gaaaatataaagatgcttcagtttcatgtagcaactctggtagataatgacatgcctggt
ttgccgagggctatgcagaagtctggaaagcccttaaaggccattaaagccaggctgaag
ggcaaggaaggaagaattcgtggaaatcttatgggaaagcgtgttgatttctctgcacgt
actgtaattactcctgatccaaatttacgaattgaccaggttggagttccacggtccatt
gcacaaaatctgacgtttccagaaattgtaacgccttttaatatagacaagatgcaggaa
ttggtaaggcgtgggaattctcaatatcctggtgctaaatatattgtaagagacaatgga
gagcggatagatcttagatttcatcccaaaccatcagatcttcacttgcaatgtggatac
cgagtggagcgacatgtcagggatggtgatctggtcatattcaaccgacagcctaccttg
cacaaaatgtcaatgatgggtcacagagtcaaagttcttccttggtctacatttcgaatg
aacctcagtgtaacatctccttacaatgctgactttgatggtgatgaaatgaatctccat
gttcctcagtctatggaaacaagagcagaggttgaaaatatacatgttacacctcgccaa
atcatcaccccacaagctaataaacctgttatgggtattgtgcaggatactctcactgct
gtgcgaaaaatgaccaaaagagatgtctttttggaaaaggaacaaatgatgaatattttg
atgcatcttccaatttgggacggcaagatgccacagccagctatattgaagcctaagcct
ctatggactgggaaacaagtcttctcccttatcattcctggcaatgtaaatatgatccgt
acacattccactcatcctgacgatgaagatgatggcccttactcctggatatcgcctggt
gatacaaaggtaatggtagagcatggtgagttggtgatggggattctttgcaagaagact
cttggtacatcagctgggtccctgttgcatatttgtatgttggagttgggacatgaagta
tgtggtcgattttacggtaacattcagactgtggtgaacaactggcttctccttgaaggt
cattccattggtattggagatacaattgctgatcctcaaacatacttggaaattcagaag
gccatcaaaaaagccaaagaggacgtgatagaggttattcagaaagcccataacatggag
cttgagcctactcctggtaacacccttaggcagactttcgagaaccaggtgaaccgtatc
ctaaacgatgctcgagacaaaactggaggatctgctaagaagtctttgactgaatataat
aacttgaaggctatggtggtgtctggttccaaaggttctaacattaacatttctcaggtt
attgcttgtgtggggcagcagaacgttgaaggaaaacgaattccttttggttttcgtaag
agaacattgcctcatttcatcaaggatgattatggtcctgagtccagaggctttgtagaa
aactcataccttgccggtttgactccatccgagtttttctttcacgctatgggaggaaga
gaaggtctcattgatactgctgtaaaaactgctgaaacaggttacatccagcgacgtttg
ataaaggctatggagtctgtaatggtacattatgatggcacggttcgtaactcagtggga
cagttgattcagttacgttacggagaggatggattatgtggtgagactgtggagttccaa
aatctgcctaccattaaactttcaaacaaggccttcgagaggaagttcaaatttgaccca
accaatgaaaggaatcttcgacgagtattcactgaagatatcctgcgtgaagtgtcagga
ggcagcagtgatattattggtgctcttgagagggaatgggaacagttggttcgagacaga
gaagctcttcgacagatatttcccagtggtgattccaaagttgtattgccgtgcaatctt
caacgtatgatttggaatgttcagaagatatttcatatcaataagagggctcccacagac
ctcagtccactacgtgttattcaaggtgttcaagacctgttgatgaagtgtgtcattgta
gctggagaagatgccttgagtaagcaggccaaccagaacgccactcttcttttccaatgt
cttgtaaggtcaacattgtgcacaaagtgtgtatccgaagactttaggctttcatcagaa
gcgtttgaatggcttattggagaaattgagacaagatttcaacaggctcagtgtcaacct
ggagaaatggttggagcgcttgccgcccagagtcttggagaacctgccactcagatgaca
ctgaacactttccattttgctggtgtgtcctcaaagaacgtaacccttggtgtgcctcgt
cttaaggaaatcatcaacataagtaaaaagccaaaagccccctctcttacggtgttttta
actggagctgctgcaagagatgctgagaaagcaaagaatgttctttgccgcttagaacat
accactttaagaaaggtgactgcaaacacagctatttattatgatccagatcctcagaat
actgtcattagtgaagatcaggagtttgtaaatgtctactatgaaatgcctgattttgac
ccaacaaggatatcaccatggctgctgcgtattgagttggaccgaaaaagaatgacagat
aagaagcttaccatggagcagattgcagaaaagatcaatacaggatttggagatgatttg
aactgcattttcaatgatgacaacgcagaacgattggtgttgcgtattcgtatcatgagc
agtgatgaaaataaatttggcggtggtgctggtggtgatgaggaagactcagttgataaa
atggaggatgatatgtttttgcgctgcattgaggcaaatatgctctctgatatgacattg
cagggaattgaagcaatcagcaaggtgtacatgcatcttcctcaaacggacagtaagaag
aggattgttgtcacagaaagtggagagtttaaagctattgctgagtggttgctggaaact
gatggcacaagtctcatgagagtgttatctgaaagggatgtagatcctgtacgaactttc
tccaacgacatttgtgaaattttctcagtgttgggtattgaggctgtccgaaagagtgtg
gaaaaagaaatgaatactgtgctgcagttctatggtctctacgtgaactatcgtcattta
gctttgctttgtgacgtcatgacagcgaagggtcatcttatggctatcactcgtcatggt
atcaacagacaggatactggtgcactaatgagatgctcttttgaagaaactgtggatgtc
cttatggatgctgcttctcatgctgaagtagatcctatgcgtggagtgtctgagaacatt
atcatgggacaactcccccggttgggaacaggggcttttgatttgttgttggatgctgag
aaatgccgtggtggcatagaaattcctgtcatgcttggagctggaatgatgttgggcact
ggtggcatgatgtttgcaaatgcagccactcctacttccagtccatatagaaccccatgg
atggttagcagctcaccagactacagaaacatgtcatggtcacctggaatgggaagtgga
agaacaccaggtgggcccagtttctctccatctggctccagtgatgccagtggcctctcc
cctggatatgcaggaagtggctggtctcctcaaccaggttctccttcgtctcccggtctc
cccagctctatttacatccctagccctagtagtagtagcattgggattggtgcaggaatg
tctccttcgtactcaccttcttccccagtatttgcaccggctgcctccagccggtcacct
ccatctcccacttacactcccacgtcacccaactactcgccaaccagtcccagctactcc
ccgaccagtcctagctatagtcccacaagtccaagttattccccgacaagcccaagctac
agcccaaccagccctagctattctcccaccagcccaagttattctcctaccagccccagc
tactccccgaccagccctagctattcgccaaccagccccagttattctcctacaagccca
agctattctccaaccagtcccagctactccccaaccagccctagctattcacctaccagt
cccagctactctccaacgagccccagttattctcctaccagccccagctactctcctacc
agtccaagctacagtccttcatcaccaacatacactccagcatcaccttcctattcaccc
acgagtcccagctactccccgacaagtcccagctacagtccaaccagtcccagctactct
ccagcatctcccagctattctccatcgagcccaaaatacagcccgacgagtccaagctac
agccctacttcaccatcttatgggggatcgcctcagtacactcctgtatcaccacagtac
agtccaaccagtccgacatactctcctaccagtccatcatatctggccactcaaggtgga
tcctcggagaggaggtcaaaggggaaaacagcgactggacctgcgactcgttactctccc
acctctcccaatttcagtccaaattctccctcttactctccttccagtcctcagtattca
ccatccagctcaaaatactctccaaccagccctacctacacccctacttctcccaagtac
tcccccacaagccccacttattcccctactggaggccctggtcaacaaggtgtgccaggc
tactcgccgacttcgccaacatattctccatcttctcctgcatatgatgattcagacaag
aactaa
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integrated database retrieval system
