Iodobacter fluviatilis: C1H71_16075
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Entry
C1H71_16075 CDS
T06803
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl00906
Carotenoid biosynthesis
ifl01100
Metabolic pathways
ifl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
C1H71_16075 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ifl01006
]
C1H71_16075 (hpnD)
Enzymes [BR:
ifl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
C1H71_16075 (hpnD)
Prenyltransferases [BR:
ifl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
C1H71_16075 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HemN_C
Peptidase_M1_N
Motif
Other DBs
NCBI-ProteinID:
QBC44898
UniProt:
A0A7G3GCJ1
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Position
3575831..3576664
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AA seq
277 aa
AA seq
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MTPEQYCEDKAAKSGSSFYYSFRFLPLEQRKAITALYAFCREVDDVVDECHEEAVARTKL
AWWRSEIDQLFAGSPQHPVTKALLTAIKQYDLQRELFIEIIDGMEMDLDMARYNSFKDLQ
LYCYRVASVVGQMAAQIFGFTDRGTLKYAHDLGLAFQLTNIIRDVGEDARRGRIYLPVTE
LQQFNVPAADILACRDTPEFRALMDFQIERAEQYYAQAMSQLPEVDKKQQRTGLVMAAIY
RATLKEIQKDGVGKVLNQRISLTPIRKLWLAWKTWWF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgacacctgaacaatattgtgaagataaagccgcaaaaagtggctctagtttttattat
agctttcgatttttgccattagagcaaaggaaagccattaccgctttatatgctttttgc
cgtgaagtggatgacgtggtggatgagtgccatgaagaagcagtggctagaactaaattg
gcatggtggcgcagtgaaattgatcagctatttgcaggctcgccccagcatccagtaact
aaagcgttattaacagcaattaagcagtacgatttgcaacgtgagttatttatagaaatc
atcgacggtatggagatggatctagatatggctcgttataatagctttaaagatttgcaa
ttgtattgctaccgagtagcctcagttgttgggcaaatggcggcgcaaatctttggcttt
accgatcgtggtacgcttaaatatgcccatgatttgggtctagcgtttcaattgactaat
atcattcgtgatgtgggtgaagacgcgcgtcgcggccgcatctatttgccggtcactgaa
ttacaacaatttaatgtgcccgctgctgatattctagcttgtcgtgatacccctgaattt
agagcgttaatggatttccaaatagagcgtgctgagcaatattacgcgcaagcaatgagt
caattacctgaggtagataaaaaacagcagcgcaccggcttggttatggcggctatttat
cgtgccacgctaaaagaaattcaaaaagatggtgtggggaaggtattgaatcagcgtatt
tctttaacgccaattcgtaaattatggctggcttggaaaacgtggtggttttaa
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