Ictalurus furcatus (blue catfish): 128609299
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Entry
128609299 CDS
T09387
Name
(RefSeq) oocyte zinc finger protein XlCOF6 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00310
Lysine degradation
ifu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128609299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128609299
03036 Chromosome and associated proteins [BR:
ifu03036
]
128609299
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128609299
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128609299
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
128609299
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128609299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
Zn-ribbon_8
zf-met
SET
Zap1_zf1
zf-C2H2_11
Zn_ribbon_SprT
zf_PR_Knuckle
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
128609299
NCBI-ProteinID:
XP_053483799
LinkDB
All DBs
Position
6:34619482..34650704
Genome browser
AA seq
715 aa
AA seq
DB search
MRSAGDRPRSSRKSRAPDPAPSQLSEEVTETSAAGTSGKVDQQNRGVHLKPTPDGGVKKE
ESLELNGYNHEDDLNNTPDVISIKVEEDDTEDYLYCEVCKSFFFNKCEVHGPPLFIPDTP
VPMGVPDRARQTLPPGLEIRKSGIPDAGLGVFNKGETVPVSAHFGPYQGELVDSEEASGY
SWVIYRSSQCQEYIDAKREMYANWMRYVNCVRNGEEQNLVAFQYQGGILYRCCRPIDPGQ
ELLVWYDEEYPKDLGSTFDSLWNKKCSANEVNNTLLQVFSCSSCPLSHTSQIDLHKHIQR
CHYEDYVRLQKSGEIKHKILPIKGQQTSSTTLGSNAAHKKMQKEVHHCSDCGKSFTHASA
LKSHQRNHTAEKPHHCSLCGKSFTYQSGLRTHQRIHTGEKPYRCSECGKSFAQQGTLQTH
QSNHTGEKPYHCSQCGKSFAYQSHLQIHQRIHTGEKPYCCSQCKRRFNQQSALQRHQRLH
TQQNLHHCSQCGKSFTQLSNLKQHQRIHTGEKPFNCSQCGKSFNRQNHLRRHHRIHTQEK
PYQCSLCWKSFADGGNLKRHQRIHTGEKPYYCSDCGKSFTDQSTLQQHQRIHTGEKPHHC
SQCGKSFTHLSTLQTHQLIHAGEKPHRCLHCGKSFNRPSALQQHQRSHAGEKPYHCSQCG
KSFTIESALQRHQRIHTEDGLCYCSQCGQSFTYLSMFRNHGCNATESLHELKLSN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcaggagacagaccgcgttcctccagaaagtctcgggcccctgatcctgct
ccttcacagctgtctgaggaggtgacggagacttcagctgcagggacatcaggcaaagtg
gaccagcagaatagaggagtccatctgaagccaacacctgatggcggtgtgaagaaagag
gagtcgctggagctgaacggctacaaccatgaagatgacctgaacaacacacctgacgtt
atctccataaaagtggaagaagatgacactgaagactacctctactgtgaggtttgcaaa
tccttcttcttcaacaagtgtgaggttcacggaccgcccctcttcatccctgatactcct
gttcccatgggagtccctgaccgagccagacaaactcttcctcctggactagagattcgg
aagtccggtattcctgatgcaggtctgggagtgtttaataagggggagactgttccagta
agtgcacacttcggaccctaccaaggagagctggtagacagcgaggaagccagtggatac
tcctgggtgatatacaggagcagccagtgtcaggaatacatagatgccaaaagagagatg
tatgctaactggatgaggtatgtgaattgtgttcgtaatggtgaagagcagaatcttgtg
gcgtttcagtatcaaggagggattctgtatcgttgctgtcgacccattgatccaggacag
gagctcctggtgtggtacgacgaggagtaccctaaagatctcggctctacgtttgactca
ctctggaacaaaaagtgctctgcaaatgaagtaaacaacactctgttacaagtcttctcc
tgctcctcgtgtccactttcccacacatctcaaattgacctccacaaacacatccagaga
tgccactacgaagactatgtaagactacagaaatcaggagagattaaacacaagattctt
cccataaaaggtcagcaaacctcatctaccactctcggctcgaacgccgctcacaaaaaa
atgcagaaggaagttcaccactgctcagattgtggaaagagttttacacatgcgagtgct
ctcaaatcacaccagcgcaatcacacagcagagaagccacatcactgctcactgtgtggg
aaaagttttacttatcagagtggtctcagaacacaccagcgcattcacacaggagagaag
ccgtatcgttgctcagagtgtgggaagagttttgcgcaacaaggtactctccaaacacac
cagagcaatcacacgggagaaaagccgtatcactgctcacagtgtgggaagagttttgcg
taccagagtcatcttcaaatacaccagcgcattcacacaggagagaagccgtattgctgt
tcacagtgtaagaggaggtttaatcaacagagtgctctccaaagacaccagcgccttcac
acacaacaaaatctgcatcactgctcacagtgtgggaaaagttttactcaactgagtaat
ctcaaacagcatcagcgcattcacaccggagagaagccgtttaattgctcacagtgtggg
aagagttttaatcgtcagaatcatctccgtcgacatcatcgcattcacactcaagaaaag
ccgtatcagtgctccctatgctggaaaagttttgccgatggaggtaatctcaaaagacac
cagcgtatacacacaggagaaaaaccatattattgctcagattgtgggaagagctttact
gaccaaagtacactccaacaacatcagcgtattcacacaggagaaaagccacatcactgc
tcgcaatgtgggaagagttttactcacctgagtactctgcaaacacaccagctcattcac
gcaggagaaaagccacatcgctgcttacactgtgggaagagctttaatcgaccgagtgct
ctccaacaacaccagcgcagtcacgcaggagagaagccgtatcattgctcacagtgtggg
aagagttttactatagagagtgctctccaacgccaccagcgcattcatactgaagatggg
ctgtgttactgctcacagtgtggacagagtttcacttatctaagtatgtttagaaaccat
ggatgcaatgccacagagtcattacatgagttgaagctgtcaaattaa
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