Ictalurus furcatus (blue catfish): 128609300
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Entry
128609300 CDS
T09387
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00310
Lysine degradation
ifu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128609300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128609300
03036 Chromosome and associated proteins [BR:
ifu03036
]
128609300
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128609300
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128609300
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
128609300
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128609300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
SET
zf-C2H2_11
Zn-ribbon_8
zf-C2H2_jaz
Zn_ribbon_SprT
zf-met
Siva
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
128609300
NCBI-ProteinID:
XP_053483801
LinkDB
All DBs
Position
6:34442415..34465966
Genome browser
AA seq
616 aa
AA seq
DB search
MRSAGNRPRSSRKSRAPDPAPSQLYEDIKTETSGGGRSDPENPPVDQQNGGVHTEIRPLC
VKKEETLELNIYNHGDDFNTTPEVISIKEEDPDNKDSLFSFPPDCEVCKSFFFNKCEVHG
PPLFIPDTPVPMGVPDRARQTLPPGLEIRKSGIPDAGLGVFNKGETVPVGAHFGPYQGEL
VDREETMSSGYSWVMYRSRQCKEHIDAKREMDDNWMGFVNCAHNAEEQNLVAFPYQGGIL
YRCCRPINPGQELLVWYKEENTKDLNPTFDYLWNQKSSNEVNNTLLEVFSCSTFVMEASQ
IDLHKHYEDYTRPQESGEIKQEIEIPSKGSSSQSTSSDSLSSDTSHNDVQKEIHHSSDCG
KHFGHHNALKTHQRSHRGEKPYHCSQCGKSFTQKGSLQLHQRIHTGEKMYHCSLCGKSFT
HQSTLQQHQRIHTGEKPYHCSQCGKSFNQKGNLQLHQRIHTGEKMYHCSQCGKSFTHLNT
LQRHQRIHTGEKPYHCSLCGKGFAQQSTLQRHQRIHTGEKPYHCSQCGKSFTQKGSLQIH
QLIHTGEKPYHCSQCGKSFTHKSTLQQHQHFHTGEKPYHCSQCGKSFTHQSTLQRHQRIH
TVEKPYHWSQCGKSFV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcaggaaacagaccacgctcctccaggaagtctcgggctcctgatcctgct
ccttcacagctgtatgaggacataaaaacagagacttcaggtggagggagatcagatcca
gagaacccccctgtggaccagcagaatggaggagtccatacggagatcagacctctctgt
gtgaagaaagaggagacgctggagctgaacatctacaaccatggagacgatttcaacacc
acacctgaagttatttccattaaagaggaagatcctgacaataaagactccctcttttct
ttccctccagactgtgaggtttgcaaatccttcttcttcaacaagtgtgaggttcacgga
ccacccctcttcatccctgatactcctgttcccatgggagtccctgaccgagccagacaa
actcttcctcctggactagagattcggaagtccggtattcctgatgcaggtctgggggtg
tttaataagggggagactgttccggtaggtgcacacttcggaccctaccagggagagctg
gtagacagagaggaaactatgagcagtggatactcctgggtgatgtacagaagcaggcag
tgcaaagaacacattgatgccaagagagagatggatgataactggatggggtttgtgaat
tgtgctcataatgcagaagagcaaaatcttgtggcatttccatatcaaggggggattctg
taccgttgctgtcgacccattaacccaggacaggagctcttggtgtggtacaaagaagag
aacaccaaagatctcaatcctacttttgactacctctggaaccaaaaatcctcaaatgag
gtaaacaacactctgttggaagtcttttcctgctccacatttgttatggaggcatcacaa
attgacctccacaaacattacgaagattatacgagaccgcaagaatcaggagagattaaa
caggagattgagattccctccaaaggctccagtagtcagtcaacatcatctgattctctg
agttctgatacttctcacaatgatgtacagaaggaaattcaccactcctcagactgtgga
aagcattttgggcatcataatgctctcaaaacacaccagcgcagtcacagaggagagaag
ccatatcactgctcacagtgtgggaagagttttactcaaaagggtagtcttcagctacac
cagcgcattcacacaggagagaagatgtatcactgctcactgtgtggaaagagttttact
catcagagcactctacaacaacaccagcgcattcacacgggagagaagccatatcactgc
tcacagtgtggaaagagttttaatcaaaagggtaatcttcaactacaccagcgcattcac
acaggagagaagatgtatcactgctcacagtgtggaaagagttttactcatctgaatact
ctacaacgacaccagcgcattcacactggagaaaagccgtatcattgttcactgtgtggt
aaaggttttgctcaacagagtactctacaacgacaccagcgcattcacacaggagagaag
ccatatcactgctcacagtgcgggaagagttttactcaaaagggtagtcttcaaatacac
cagcttattcacacaggggagaagccgtatcattgctcacagtgtggaaagagttttact
cataagagcactctacaacaacaccagcactttcacacaggggagaagccgtatcattgc
tcacagtgtggaaagagttttactcatcagagtactctacagcgacatcagcgcattcac
acagtagagaagccatatcactggtcacagtgtggaaagagttttgtttga
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