Ictalurus furcatus (blue catfish): 128611740
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Entry
128611740 CDS
T09387
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128611740 (trdmt1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
128611740 (trdmt1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128611740 (trdmt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DUF1221
Motif
Other DBs
NCBI-GeneID:
128611740
NCBI-ProteinID:
XP_053487475
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Position
1:complement(19546007..19553927)
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AA seq
390 aa
AA seq
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MEKLRVLELYSGIGGMHYALRGIFPDIESSVPTEVVAAVDVNTTANEIYKHNFPNTLLLP
KTIEGMALSDFNKLDFDMILMSPPCQPFTRIGLQGDVNDPRTKSFLYILDILPRLNKMPR
FILLENVKGFETSSARNALIKTLQDCSYNFQELMISPTCLGIPNSRLRYFLIAKAPPDSF
SFQKTAEILEGFPKSDSSFDTDSPTIPDSHCSTVNGDMREDETIIYKMETAQELERKRSQ
DNEQTVRRLQDFLEKEVQGTDMDSYLLPPKILLRYALLMDIVNPNCRRSVCFTKGYGHYV
EGTGSVLQSCTGVELDSIFKSLDALSEEEKLEQLSQLKLRYFTPREIANLMGFPPHFSFP
SNISTKQQYRVLGNSLNVHVVAKLISLMVS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctccgtgttttggaactgtacagtggcattggagggatgcattatgcattg
cgaggtatcttcccggatattgagagctcagtccccactgaagtggtagccgcggtggat
gtgaacacgacggccaatgaaatctataagcacaacttcccaaatactctgctgctaccc
aagaccattgaaggaatggcattaagcgatttcaataaactggactttgatatgattttg
atgagccctccttgtcagccttttacgaggattggattacagggtgatgtaaatgacccc
agaacaaaaagctttctctacatcctggacattttgccaaggttgaacaagatgccccgc
ttcattctgctggagaatgtgaaaggctttgagacgtcctctgccagaaatgccttgata
aagactttgcaggactgtagttacaactttcaggaattaatgatatcacccacttgtcta
ggaataccaaactcaaggctgcgttattttcttattgctaaagctcccccagattccttc
tcatttcagaaaacagcagagattctagagggctttccgaagtcagactccagctttgac
acagacagtcccacgatccctgacagccattgtagtacagttaatggtgacatgagagaa
gatgagactataatctataagatggagacggcacaggagctggagaggaagaggagtcag
gacaacgaacagacagtgagaagactacaggatttcctggaaaaggaagtacaaggaaca
gacatggacagttatttgctccctccaaagattctgctcagatacgccttgctcatggac
atagtcaatccaaactgcaggagatcagtctgcttcactaaaggatatgggcattatgtg
gagggaactggttctgttctgcagtcgtgtacaggtgtggaactggacagcatctttaag
tcactggatgcgctatctgaagaggagaagctggagcagctgtcccagctgaagctcaga
tacttcacacccagagagatcgccaaccttatgggcttcccaccacatttcagctttcca
tcaaatatctccacaaagcagcagtaccgagttctgggaaacagtctaaatgttcatgta
gtggccaagctcatcagtctcatggtgtcatga
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