Ictalurus furcatus (blue catfish): 128622514
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Entry
128622514 CDS
T09387
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128622514 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NODP
Ank_4
Ank_5
NOD
Ank_3
EGF_3
JAG1-like_EGF2
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
128622514
NCBI-ProteinID:
XP_053505069
LinkDB
All DBs
Position
18:1430716..1452193
Genome browser
AA seq
2446 aa
AA seq
DB search
MNRFLLMSLFLGTAPVCEGKGLRCSEPCQNGGACELTAGGKPGCSCPADYAGAQCQFPNP
CSPSPCRNGGVCRPRTQGNDVEFACDCTLGFSGPLCLTPVNHACMSSPCRNGGSCSLLTL
STYSCRCPPGWTGKTCQQADPCASNPCANGGRCSAFESHFICTCPPSFHGPTCRQDVNEC
ATTPSPCQNSGACINEVGSYRCHCPPEYAGTHCERPFQPCQPSPCANGGTCTQTSDTGYA
CTCLPGFTGQDCEHNIDDCVQHACENGGRCMDGVNTYNCHCDKHWTGQYCTEDVDECELS
PNACQNGGTCHNTVGGFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFYCECP
HGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPPGYTGSACNQDIDECSLGANP
CEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGY
EGVFCQINTDDCASQPCLNNGKCIDKINSFHCECPKGFSGSLCRVDVDECASTPCQNGAK
CTDGPNKYACECKEGGCARQHTRCIHTGDALKSNVLTVFVLSLLSAGFTGSMCEIDINEC
ASNPCHYGVCKDGVASFACACRPGYAGRLCEININECLSQPCRNGGTCLDRENSYTCSCP
KGTTGRNCEINVDDCKRNPCDFGKCIDKINGYECLCEPGYTGATCNANIDDCAPNPCRNG
GTCVDGVNSFTCLCPDGFHDSVCLSQRDECASNPCIHGNCQHQANAYVCVCEPGWTGRNC
DLNVNECLSNPCVNGGTCRDMTNGYICSCKAGFTGPNCQTNINECASNPCLNQGTCIDDV
AGYKCNCLLPYTGELCESVLAPCSTRPCKNRGVCRESEDYQSFSCACPIGWQGQTCEVDI
NECVKSPCRNGGVCVNSMGGFQCRCNPGFTGDLCETDIDDCTPNPCGNGGVCVDRVNGFT
CVCVAGFRGERCTEDIDECVSAPCRNGGNCTDCVNSYTCSCPAGFSGINCEINTPDCTES
SCFNGGTCVDGINSFSCVCLPGFTGSYCQHDVNECDSGPCLNGGTCQDGYGTYKCTCPHG
YTGTSCQSLVRWCDSAPCKNGGSCWQQGSSFTCQCASGWTGIYCDVPSVSCEVAAQQQGV
SVAALCRNGGQCVDAGSTHLCRCQAGYMGSYCQEQVDECVPNPCHNGATCTDYLGGYTCE
CVAGFHGVNCSKEINECASQPCQNGGTCIDLVNTYKCSCPRGTQGVHCEIDVDDCSPDVD
SETGEPRCFNGGRCVDRVGGYGCVCPPGYVGERCEGDVNECLSDPCDPNGSYNCVQLVNS
YRCECRTGYTGQRCDTVFDGCKDKPCKNGGTCAVASNTKHGYICKCPPGFSGSSCEYDSS
SCGPLRCRHGASCVPGPRCLCPPGYSGRECQTRLDTPCASNPCYNGGTCQTSAEAPFFHC
LCPSHFNGLFCHILDYSFNGGRGLDITPPPAESEEAEPRCEVPQCEQRGGDGVCDAACNS
HACGWDGGDCSLNFDDPWHECSAALQCWRYFNDGKCDMQCHSAGCLYDGFDCHQLEGQCN
PLYDQYCKDHYSDGHCDQGCNSAECGWDGLDCAEDVPQRLASGILVLVVHLPPGELLHNA
SSFLRQLSALLRTNVALKRHATTGEPLVYPYYGTEHELSKHTRTAHEWNTNPGHLLQRTA
RSLSALLKPRHRRELDTMEIKGSIVYLEIDNRQCYQQSEECFQSATDVAAFLGALASSGN
LNVPYIIEAVTSENEAPGRGEMYPMFLALLVLAVLVLAAVGVVLSRKRKREHGQLWFPEG
FKVTETKKKRREPVGEDSVGLKPLKNSDSSLMDEQLSEWAEEDHCKRFRFDEHTTTDIGI
QPDPRQWTQQHLDAADLRLTSIAPTPPRADTDTDCVDVNVLGPDGLTPLMIASCSGEVGE
EEEGEEGVIANFLWHGADPHQRTERAGETALHLAARYARSDAAKRLLESGADANAQDHAG
RTPLHAAVAADAQGVFQILIRNRATDLDARMNDGTTPLILATRLAVEGMVEELINCHADA
NAIDDSGKSALHWAAAVNNVEAAVVLLKNGANKDLQDNKEETPLFLAAREGSYETAKRLL
DHLANRDITDHLDQLPRDIANERMHHDIVRLLEEYNLVQTPPTLTHSPPICSPEAFLGIR
TSPGGANNANNAKKPRKPGGKEGGKEMKMKKKKNGDTNILSPMESDVSSPPTMTSPFQQS
PPITHHLQGLADSQMGGAHLGMAKPFDSAPPRLSHLGVANNGGGAPTGPCDWLARAQQQQ
QGAFSAIMPTMHHGANLPQVMGYPTMQSSHLGAPAHLLSNHLHQNHLQHQNSNSANHGLS
HHFLGDITSVAELQSNSIQTLLPQETQRLPSTQFLTPPSQHSYSTPMDNTPNHQPQVPDH
PFLTPSPGSPDQWSSCSPHSNLSDWSEGISSPPTSIHMSHIPEAFK
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttgttgatgtccttatttctcgggacggctccggtgtgtgaggggaaa
ggtctgaggtgttcggagccatgtcagaacggaggagcgtgtgagctcaccgccggcggg
aaaccaggctgcagctgccccgcggactacgcgggagcccagtgtcagttcccgaacccg
tgcagtccatcgccatgccggaacggaggtgtgtgtcgtccgcgcacgcagggcaacgac
gtggagtttgcgtgtgactgtacgctgggtttcagcgggccgctgtgcctgacacccgtc
aatcacgcctgcatgagctcaccgtgccgcaacggaggatcctgctcgctgcttacgctc
agcacctacagctgccgctgcccaccgggctggacaggtaagacgtgccagcaggcggac
ccgtgcgcgtcaaacccctgcgccaacggtggccggtgctcagcgttcgaatctcacttt
atctgcacgtgcccgcccagctttcacgggcccacgtgccgccaggacgtaaacgagtgc
gccacaactccctcgccctgccagaacagcggcgcgtgtataaacgaggtgggctcgtac
cgctgccactgcccacccgagtacgctggcacacactgtgagcgccccttccagccctgc
cagccttctccctgtgctaacgggggcacgtgcacgcagaccagtgacaccggctacgcc
tgcacctgcctgccaggcttcaccgggcaggactgcgagcataacattgatgactgtgtt
cagcacgcgtgtgagaacggaggcaggtgtatggacggcgtgaacacatacaactgccac
tgtgacaaacactggacaggtcagtactgcacggaagacgtagacgagtgcgagctctct
ccgaacgcctgccagaacggcggcacgtgtcacaacacggtgggcggcttccactgcgtg
tgcgtgaacggctggacgggcgacgactgcagcgagaacatcgacgactgcgccagcgca
gcctgctaccacggcgccacatgccacgaccgcgtcgcatcgttctactgcgagtgccct
cacgggcgcaccggtctgctgtgtcatctggatgacgcgtgcatcagtaacccgtgtcag
aaaggctccaactgtgacaccaatcccgtcaatggcatggccatctgcacctgccctccg
ggctacaccggctctgcctgcaaccaggacatcgacgagtgctccctcggggccaatcca
tgcgagcatggcggccggtgtctgaacaccaagggctcattccagtgcaagtgcctccag
ggctatgaggggccacgctgtgaaatggacgtgaacgagtgcaagtctaatccgtgccag
aacgacgccacctgccttgatcagatcggtggttttcactgcatttgtatgccagggtac
gagggcgtgttttgccagatcaatacagatgactgcgcctcccagccttgtctcaacaac
ggcaaatgcatcgacaagatcaactccttccattgcgagtgccctaaaggattctctggg
agcctgtgccgagtggacgtagacgagtgtgcaagtacgccgtgccagaacggagccaag
tgcactgacgggccaaacaaatacgcctgcgagtgcaaagaaggtgggtgtgcgcgccaa
cacacgcgttgcattcacacaggagacgcgcttaaatcgaacgtcttaaccgtcttcgtt
ctttctcttctttctgcaggtttcaccggctctatgtgcgagatcgatataaacgagtgc
gcctcaaacccgtgccactacggcgtgtgtaaggacggcgtggcttcgttcgcgtgcgcg
tgccgccccggatacgcgggccgcctgtgcgagatcaacatcaacgagtgtttgagtcaa
ccgtgccgtaatgggggtacctgcctggaccgggagaactcgtacacctgcagctgtcct
aaaggaaccacgggtcggaactgtgagatcaatgtagatgactgcaaaagaaacccatgt
gacttcggcaaatgcatcgacaagatcaacggatacgagtgcctgtgtgagcctggatac
acaggagcgacgtgtaacgccaacatcgacgactgcgcgccgaacccgtgccgtaacggt
ggcacctgtgtggacggcgtgaactcgttcacttgcctctgccctgacggcttccacgac
tccgtatgcctctcacagcgcgacgagtgcgccagcaacccctgcatccacggcaactgt
cagcaccaggccaacgcgtacgtgtgcgtgtgtgagccgggctggacgggccggaactgc
gatctgaacgtgaacgagtgtttgtccaacccgtgtgtaaacggcggaacgtgccgagac
atgaccaatggctacatctgcagctgcaaagcaggattcacaggtccgaattgccagacg
aacatcaatgagtgtgcatccaacccctgcctgaaccagggcacctgtattgatgatgta
gctggatataagtgcaactgcctgctgccctatacaggcgagctgtgcgagagcgtgttg
gctccctgctctacacgcccatgtaagaacagaggtgtgtgtcgcgagtctgaggactac
cagagcttctcctgtgcttgcccaattggctggcaaggtcagacgtgtgaagtggacatc
aacgagtgtgtgaagtccccatgccgtaatggcggcgtgtgcgtgaactcaatgggcggc
ttccagtgccgatgtaacccgggattcacgggagacctgtgtgagaccgacatcgacgac
tgcactcccaacccctgcggcaacggcggcgtgtgcgtggaccgcgtgaacggcttcacg
tgcgtgtgcgtggccgggttccgcggtgagcgttgcaccgaggacatcgacgagtgcgtg
agcgccccctgccgcaacggggggaactgcacagactgcgtgaacagctacacctgcagc
tgcccggccggattcagcggcatcaactgtgagatcaacacacccgactgcaccgagagc
tcctgcttcaacggcggtacatgtgtggatgggattaactcattctcatgcgtctgtctg
cccggcttcacgggcagctactgccaacacgacgtaaacgagtgtgactcgggcccatgc
ctgaacggcggtacatgccaagacggctacggcacctacaagtgcacctgcccacatggc
tacacgggcaccagctgccagagcctggtgcgctggtgtgattccgccccttgtaaaaac
ggaggctcgtgttggcagcagggctcttctttcacgtgtcagtgtgccagcggctggact
ggaatctactgcgacgtgcccagcgtcagctgcgaggtcgccgctcagcagcaaggtgta
tccgtggccgctctgtgccgtaacggaggccagtgtgtagatgcaggcagcacgcacctg
tgccggtgccaggcaggctacatgggcagctactgccaggagcaggtggacgagtgtgtg
ccaaacccatgtcacaacggcgcaacctgtaccgattacctgggcggatacacctgcgag
tgtgtggcgggattccacggggtcaactgcagcaaggagatcaacgagtgtgcgtctcag
ccttgtcagaacggaggcacctgcatcgacctcgtcaatacctacaagtgctcctgccct
cgaggaacgcaaggcgttcactgcgaaatcgacgtggacgactgttccccggacgtggac
tccgagaccggtgagccacgctgttttaacggcgggcgctgcgtggaccgtgtgggcggc
tacgggtgtgtttgcccgccgggctacgtgggtgagcgctgcgagggcgacgtgaacgag
tgcttgtccgacccctgcgacccgaacggatcctacaactgcgtccagctggtgaacagc
taccgctgtgaatgccgcacaggatacacgggccagcgctgtgacacagtgtttgacggt
tgtaaggataagccctgcaaaaatggtggaacctgtgcagtcgccagcaacactaaacac
ggatacatctgcaaatgcccgcctggtttttcaggctcgtcgtgcgagtatgactcaagc
tcatgtggcccgctgcgctgccgccacggtgcctcctgtgtcccgggtccgcgctgcctt
tgcccgccgggttacagcggacgcgagtgccagacacgcctcgatactccatgtgcttcc
aacccgtgctacaacggtggcacgtgccagacgtctgccgaagccccgttcttccactgc
ctgtgcccgtcacacttcaacggcctcttctgccacatcctagactattcgttcaacggg
ggccggggcctggacatcacccctccgccagccgagtcagaagaggcggagccacgttgc
gaggtgccgcagtgtgagcagcgaggcggcgacggcgtgtgcgacgcagcctgcaacagt
cacgcgtgcggctgggacggcggggactgttcgctcaatttcgacgacccctggcacgag
tgcagcgccgccctgcagtgttggaggtacttcaacgatggcaagtgcgacatgcagtgt
cacagcgctggctgcctctacgacggctttgactgccaccagctggagggccagtgcaat
cccttgtatgatcagtactgtaaggaccactactcggacggacactgcgatcagggctgc
aacagtgccgagtgtggctgggacgggctggactgtgccgaggatgtaccgcagcgtctg
gcatctggcatcctggtgcttgtggtgcacttgccacccggtgagctgctccacaacgct
tcctccttcctgcgccagcttagcgccctgttgcgcaccaacgtcgccctcaagcgccac
gccaccacgggcgagcctctggtctacccgtactacggcaccgaacacgagctgagcaaa
cacacacgtaccgctcacgagtggaacacaaaccctggccacctgctgcagcgtaccgcc
aggagcctgtcagcgttgctcaagccccgccatcgacgagagctggacaccatggagatt
aaaggctccattgtatatctggagatcgataaccggcaatgttaccagcagtcagaagag
tgttttcagagtgcaacagatgtggctgcgttcctgggggcgctggcctccagcggcaat
ctcaacgttccttacattatagaagctgttacgagtgagaacgaggccccaggccgtgga
gagatgtaccccatgttcctggctctcctggtcctggctgtgttggtcctggctgccgtc
ggagttgtgctgtcacgcaagcggaagcgagagcacggccagctgtggttccccgagggc
tttaaagtgaccgaaaccaaaaagaaacgcagagaacctgtcggagaggactccgttgga
cttaagcctctgaagaactctgatagcagtctcatggacgagcagctgagcgagtgggca
gaggaagaccactgcaaacgtttcaggtttgatgagcacaccacgacagatatcggtatc
cagccggatccgcgtcagtggactcagcagcatctcgacgcggccgacttgcgcttgacc
tcgatagctcctacgccgccgcgggcagacacggacaccgactgcgtagacgtgaacgtg
cttggcccggatggcctgacacctctgatgatcgcctcgtgcagcggtgaggtcggcgag
gaggaggagggggaggaaggcgtcatcgccaacttcctgtggcacggcgccgatccacac
cagcgtacagagcgcgcgggtgagacggcgctgcacctggccgcccgttatgcccgatcc
gacgccgcaaagcgccttctagagtccggggcagatgccaacgcacaggaccacgcggga
cgcacgccgctacacgccgccgtggctgccgatgcacaaggagtctttcagatcctaatc
cggaatcgggctacagatctggacgcgcgcatgaacgatggcacgacgccactcatcctg
gccacacgcctagcagtggagggcatggttgaggagctcatcaactgccacgccgatgcc
aatgccattgatgactctggaaagtccgctctccattgggccgctgctgtcaacaacgtc
gaggccgccgtagtgcttctgaagaacggggccaacaaggatctacaggacaacaaggag
gaaacgcccctcttcttggccgcgcgcgagggcagctatgagacggcaaagcgcctcctc
gaccacctggccaaccgcgacattacggatcacctggatcagctgccacgtgacatcgcc
aatgagcgtatgcaccatgacattgtgcgtctgctggaagaatataacctggttcagacc
cctcccactcttactcattcaccccctatctgctcgcccgaggccttcctgggcatcagg
actagcccgggaggcgccaataacgcgaataacgcaaagaaaccccgcaaacccggaggg
aaggagggaggaaaggagatgaagatgaaaaagaaaaagaacggagacacgaacatcctt
tctccgatggaatcggatgtctcctcacccccgaccatgacatcgcccttccaacagtcc
ccacctatcacccatcacctgcaagggttggctgactcccaaatgggcggggctcacctg
gggatggcaaagccatttgactccgctcctccacgcttgtctcatctcggagtggctaat
aacggaggtggagctccaacggggccatgcgattggctggcaagggcacagcagcagcaa
caaggggcattctcggctataatgccgacaatgcaccacggcgctaacttgccgcaggtg
atgggctatcccacaatgcaaagcagccacctgggcgcaccagctcacctgctgtccaac
cacttgcatcaaaaccatctgcagcaccaaaactcaaattctgccaatcatggcctctct
caccacttcctgggtgacatcacttcggtagcagaacttcagtccaactcaatccaaacc
ttgctcccgcaggagacgcagcgccttcccagcacgcagttcctgactcctccttctcag
cacagttactccacccccatggacaacacgccgaatcaccagccacaggtccctgatcat
cccttcctgactccatcccctggctctcctgaccaatggtctagctgctctccacattcc
aacttatctgattggtcagagggaatctcgagcccacccaccagcattcatatgagtcac
atccccgaagcattcaagtaa
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