Ictalurus furcatus (blue catfish): 128622522
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Entry
128622522 CDS
T09387
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04020
Calcium signaling pathway
ifu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128622522 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128622522 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128622522 (grin1a)
Ion channels [BR:
ifu04040
]
Ligand-gated channels
Glutamate (ionotropic)
128622522 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
128622522
NCBI-ProteinID:
XP_053505079
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Position
18:6072707..6105696
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AA seq
947 aa
AA seq
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MRFFVPFILLSCSCALGGCEMKIVNIGAVLSQKRYEQVFKDAVNQASVVYGRDRFKLNAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEDDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVLNKQRKIIWPGGDTDRPKGFQMSTWLKIVT
IHQEPFVYVKPTMLDGTCREEYTPNGVLIKKVICTGPNETIPGRPTVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAEPDPK
KKPSFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttttgtgccctttattctgctctcctgctcctgcgctctgggaggctgcgag
atgaaaatcgtgaacatcggcgcggtgctgagccaaaagcgctacgagcaagtgtttaag
gatgcggtgaaccaggccagcgtggtgtacggcagagacaggtttaaactcaacgccatc
tccgtgacgcacaaagccaacgctattcagatggcgctgtccgtgtgtgaggacctcatc
tccagccaggtctatgcgattttggtgagccaccctccacagtccagtgaccacctcaca
cctacaccggtctcctatactgcaggcttctaccgtatccctgtagttggccttacaacc
aggatgtccatctactctgataagagtattcatctttccttcctgcgcactgtaccacct
tactcgcaccaggcgcacgtgtggttcgacatgatgcgtgagttccgctggaaccacatc
atcctgatcgtcagcgacgaccacgaaggtcgagccgcacagaagagactcgagaccctt
ctggaggagagggagaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcaaccaagagactaac
ttaactgccctgctgctggaggccaaggagctggaggctcgcgtgatcattctgtccgcc
agtgaagacgacgctgctgccgtatacaagaccgctcggtttctcaacatgactggctct
ggctacgtgtggctagtcggagagcgggagatgtctggtaaagctctgagtgaagctcct
gatggactaattggccttcagctcattaacggcaagaatgagtcagcacacatcagcgac
gcagtggcagtcgtggctcagtccattcaggagctttttgagaaggagaacatcactgag
ccgcctcggggttgtgtgggcaacacaaacatctggaagactgggccactctttaaaagg
gttctgatgtcatccaaatacccagaaggcttgacaggacgagtggagtttaatgatgat
ggagacaggaagtacgctcattacagcatccttaactaccagaagagcaggctgattcaa
gtcggcatttataatggaactcaggtggtgctaaataagcagaggaagatcatctggcct
ggaggagatacagacagaccgaaaggtttccagatgtctacatggctaaaaatagtcaca
atacatcaggagccttttgtgtacgtgaagccaacaatgctggatgggacctgcagggaa
gagtacacaccaaatggagtcctaattaaaaaggtgatctgcactggaccaaatgaaacc
atcccaggacgcccaacagtccctcagtgctgttatggattctgcgttgacctactgatc
aagctcgccatgactatgaactttacttatgaggtccatctggtggctgatgggaaattt
ggaacacaggagagagtgaacaacagcaacaagaaggagtggaatggcatgatgggcgag
ctcctgggcggccttgcggacatgatcgtggctccactaacgataaacaatgaacgagct
cagtacattgaattctccaaaccgttcaaatatcagggcctcaccatccttgtgaaaaag
gaaatccctcgtagtacgctggactcgttcatgcagccgttccagagcacgctgtggctg
ctggtgggtctatcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccattcggaaggtttaaagtaaacagtgaagaagaagaagaagatgccctcaccttatcc
tcggctatgtggttctcctggggagtgttgctgaattctggaattggagaaggtgccccg
cgtagcttctcagcgagaatcctaggtatggtgtgggccggctttgctatgatcattgta
gcatcctatactgccaacctggctgccttcttggtgctggaccggcctgaggagcgcatc
accggcatcaatgacccgaggttgaggaacccatcagacaagtttatctacgccacagtg
aagcagagttcggtggatatctacttccgacgccaggtcgagctgagcaccatgtatcgc
cacatggagaagcacaactacgagagcgccgctgaggccatccaggctgttcgggacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggctattctcagttcccatgagaacggcttc
atggaggacctggataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtctttatgctggtagctggaggcatt
gcagcagggatcttcctcatctttattgagatcgcatacaagcgacacaaagacgcccgc
aggaagcagatgcagctagcctttgcggccgtcaacgtctggagaaagaacctgcagccc
tcttcctctgtagagactcaggatgataggaaaagtggtagagcagagccagaccccaaa
aagaaaccctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtagg
tcctccaaagacacgcagtacccacctacagacatcacgggccagctcaacctgtccgac
ccatctgtcagcaccgtggtgtga
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