Ipomoea nil (Japanese morning glory): 109149040
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Entry
109149040 CDS
T04663
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109149040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109149040
Enzymes [BR:
ini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109149040
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109149040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
109149040
NCBI-ProteinID:
XP_019152211
LinkDB
All DBs
Position
Un
AA seq
1187 aa
AA seq
DB search
MEEKTAGGGAMNRPHLMKEKDYSALKELFAHHIESFDHMVDQGLETMLMAIKPVEVSDPF
SGHKLRIWFGKPELFPPQKDRGYKGVQDALYPFECRQAKLSYTGKFMVDICLQYDDGAVV
REKINFGQFPIMLKSKLCQLRNIDNPRKMASRKEDPSEMGGYFILNGLERVVRLLILPKR
NYPTSMVRNSFRDKREGYTDKAIAIRCVREDQSAVTLRLYYLSNGSARLGFWIQGREYLL
PAGVMLKALVDTTDRDIYVSLACIYNERYDQAKGSVGTQLVGERAKIILDEVQNLSLFTR
SQCLQHIGEYFQPVMSGMEKESYSAVAEAILRNFIFVHLDNNHDKFNLLIFMLQKLFSLI
DQTSVPDNPDSLQNQEVLLPGHLITIYLKEKLEDWLARTKQSLKEQIDSKNTKFQFSSLA
DLKKIIERNGPRQISTAIENMLKTGRLATQSGLDLQQRAGMTVMAERLNFLRFLSHFRAV
HRGAALAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLAAACRITSYYDAKGNIKD
FFKIRSSISSVLTSIGMSPSLPRLAQAGPPELLSVLLDGRVVGTIPFDLVEKAVAHLRRL
KLSAVSAIPIDLEVGYIPPSMGGGYPGLFLFTCPSRFVRPVRNISVSPQDGNDTELIGPF
EQVYMEISCPDGRDGGRRNLFPATHEEFHATNILSVVGNLTPWSHHNQSPRNMYQCQMGK
QTMGFSSQAINCRADQKLYHLQTPQTPIVRTRAYEKYCVDDYPLGTNAIVAVLAYSGYDM
EDAMVLNKSSVDRGMCHGHVYQTETIDLAEQSGKSDRSQKTFRRSNRDKPSHHLIDTDGL
PYVGQTINPNEPYYSVYNEITSEHRSFKLKGSESVVVDYVAVDAKTKNNIQKANIRLRRT
RNPIIGDKFSSRHGQKGVCSQLWQDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESI
AAKGGALHGNFVDATPFYNTVKTESKELESGSDSLVDELGSLLKARGFNYHGVEVLYSGV
YGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDHVTRQPIKGRKRGGGIRFGEMERD
SLLAHGAAYLLHDRLHTSSDHHIADVCSICGSILTSSLIQPPKRAMRHIAGLPPAKDPKK
VVCVACQTSKGMETVAMPYVFKYLAAELAAMNIKMNLQLSTGQEPDS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaacagcaggtggtggagcgatgaatcggccgcacttgatgaaggagaaa
gactactcggcactgaaagagctgttcgctcatcatatagagtccttcgatcacatggtg
gaccaaggacttgagactatgcttatggctatcaagcccgtcgaggtctccgatcccttc
tccggccacaagcttagaatttggtttgggaaacccgaattattccctcctcaaaaggat
cgtggttacaagggtgtacaggatgctctgtatccctttgagtgtagacaagcaaaactt
tcatacacaggcaagtttatggtggatatttgccttcaatatgatgatggagctgttgta
agagaaaaaattaatttcggccagtttccaatcatgttgaagtcaaagctctgccaattg
agaaatattgacaaccccagaaaaatggcatctcgcaaggaagatccatcagaaatgggc
gggtacttcattttgaatggtcttgagcgtgtagttcggcttttgatattaccaaaacga
aactatccaacgagtatggtgcggaattcatttcgtgataagcgagaaggttatactgat
aaagctattgcaataaggtgtgtaagagaagaccaatctgcagtgacattgagactgtat
tatcttagtaatggaagtgcaagacttggattctggatacaaggaagggaatacttgctt
cctgctggtgtcatgttaaaggcccttgttgacacaactgatcgtgatatatatgtcagt
ttagcatgtatttacaatgagagatatgatcaagcaaagggatctgttggcacccagctt
gttggtgaaagggcaaaaattattctggatgaagttcagaacctttctctttttacacgg
agccagtgcctccaacatattggagaatattttcaacctgttatgtctgggatggaaaaa
gaaagttattctgctgttgctgaagctattcttcgaaacttcatatttgtccatttggat
aacaatcatgataagtttaatctgctgatcttcatgttgcagaagcttttttctctcata
gatcagacttctgttccagacaatcccgactcgttgcaaaatcaagaagttttgctgcct
ggccacttgataacaatatatctcaaggaaaagctagaagattggttggcaaggacaaaa
cagtcacttaaagaacaaattgacagcaaaaacacgaagtttcaatttagcagcttggct
gatctgaagaaaattattgagagaaatggcccgagacagataagtacagctattgagaat
atgttaaagactgggagattggcgacacagtctggtcttgatttgcagcagagagctggg
atgacagttatggcagaaagattaaattttctgcgtttcctttcacattttagagctgtc
catcgaggtgctgcacttgctggtcttcgtactactagtgtgcggaaattgttacctgaa
tcttggggtttcttatgtcctgttcatacacctgatggggagccatgtgggttgctaaac
catttagctgctgcttgtcgtatcacttcatattatgatgccaaaggaaacatcaaagat
ttcttcaaaattagatcgtcaatttcaagtgtgctaacaagtattggtatgagcccatca
ttgccaaggcttgcccaggcaggccctcctgaattgctatctgttcttctagatggtcgt
gttgttggtactataccatttgatcttgttgaaaaagctgttgcccacttgcgaagactg
aaactgtcagcagtatcagcgattccgattgatttggaggtgggatatatacctccgagc
atgggcgggggatatcctggcttatttctgttcacatgtccttctagatttgtccgccca
gttagaaacatctctgtttctcctcaagatggcaatgacactgaactcattggacccttc
gaacaggtgtatatggagataagttgtccagatggcagagatggaggaagaagaaattta
tttcctgccactcatgaggaattccatgcaacaaatattttgagtgttgtcggtaatttg
acaccttggtcccatcataatcagagtccacgtaatatgtatcagtgtcagatggggaaa
caaaccatgggtttctcttcacaagcaataaactgtcgtgctgatcaaaagctctatcac
cttcagaccccccagactcccattgtacgtactagagcatatgaaaaatactgcgttgat
gactatcctttaggaacgaatgcaattgtggctgttctggcttattctggatatgacatg
gaggatgctatggtcttaaataaatcatctgttgaccgtgggatgtgccatgggcacgta
taccagacagaaacaattgatttagctgaacagagtggcaagtcagatcgttctcagaaa
acgtttaggagaagcaatcgtgataagccatctcatcacctgattgatactgatggactt
ccatatgttggccagacgataaatcctaatgaaccatattatagcgtctacaatgagata
acaagtgaacacagaagcttcaaattgaaggggtcagaatctgtcgttgttgactatgtt
gctgttgatgctaaaaccaaaaataatattcaaaaggcaaacatacggttgcggcgtact
aggaatcctataattggagacaaatttagcagtaggcatgggcaaaagggggtttgttct
caactctggcaagatattgatatgcctttctcaggtgttacaggaatgaggccagatcta
atcattaatcctcatgcatttccttcgaggatgactattgcaatgcttttggaatcaatt
gctgctaagggaggagctttacatgggaattttgttgatgcaacgccattttataacaca
gttaaaacagaaagcaaggaattagaatctggatctgattcactcgttgatgaactcgga
tctttgttgaaagctcgggggttcaattaccatggtgtagaggtactgtatagtggagtt
tatgggacagagctgacatgtgaaatatttattgggcctgtttattatcaaaggcttcgg
cacatggtttcggataagtttcaggtgcggtctactggaacagtggaccatgtcactcga
cagcccattaaaggaagaaaacgtggtggaggtatccggttcggagaaatggagcgagac
tcccttttggcacacggggcagcatatttgttacacgatagacttcatacaagttcagat
caccatattgcagacgtttgctcaatttgtggaagcattctcacatcatcactcatccag
ccaccaaaacgggcaatgcgtcatatagctgggctaccacctgccaaagatcccaagaag
gttgtatgcgttgcttgccaaacgagtaaaggaatggagacagtcgcaatgccatatgtg
tttaagtatttggcagcagaattagcagccatgaacataaagatgaacctccagctgagt
acgggacaggagcctgatagttaa
DBGET
integrated database retrieval system
