Ipomoea nil (Japanese morning glory): 109168408
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Entry
109168408 CDS
T04663
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00900
Terpenoid backbone biosynthesis
ini01100
Metabolic pathways
ini01110
Biosynthesis of secondary metabolites
Module
ini_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109168408
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ini01006
]
109168408
Enzymes [BR:
ini01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
109168408
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
109168408
2.5.1.29 geranylgeranyl diphosphate synthase
109168408
Prenyltransferases [BR:
ini01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
109168408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
109168408
NCBI-ProteinID:
XP_019172979
LinkDB
All DBs
Position
Un
AA seq
367 aa
AA seq
DB search
MSLANPSTTWANTHSFCGRFRSGSLIKNNEFRINMSFPSSIKKPLFHSCSAILTKEQANA
IPQEESENKKPTKLDFKAYVLGKASSVNKALEAAVLLKEPRKFHEAMRYSLLAGGKRIRP
MLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDMRRGKPTNHKVYGEGV
AVLAGDALPGFAFEHIATATKGVPSEKIVRVIGELAKSIGAEGLVAGQVVDICSEGISDV
GLEHLKFIHLHKTAALLEASVVLGAILGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTK
SSKELGKTAGKDLIADKVTYPKLLGIQKSREFAEQLNKEAQAQLSGFDQGKVAPLIALAN
YIAYREN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcaaatcctagtacaacttgggcaaacacccattctttttgcggtagattc
agatccgggtctctcataaaaaacaatgaattccgcataaatatgtcattcccaagctca
atcaagaaaccgctgtttcattcttgttctgcgattctcaccaaggagcaggctaatgca
attccccaggaagagagcgagaacaagaaaccgaccaagcttgatttcaaggcgtacgtg
ttggggaaggcgagttcggtgaacaaggcgctggaagcggcggtgttgctgaaggagccg
cggaagtttcacgaagccatgaggtactctctcctcgccggcgggaagagaatccggcca
atgctatgcatcgccgcctgcgagctcgtcggcggggacgaggccaccgccatgccggcg
gcctgcgcggttgagatgattcacaccatgtctctgatgcacgacgaccttccgtgtatg
gacaacgacgatatgcggcgagggaagcccacgaaccacaaggtttacggggaaggcgtg
gcggttctcgccggggatgccttgccggggtttgcctttgagcatatagccaccgccaca
aaaggggttccctcagagaagatagtgagggttattggtgaattggctaagtccattggc
gctgaggggctggtggctgggcaggtggtggatatatgctcagagggcatctccgatgtg
ggattagaacatttgaagttcattcatctccacaaaaccgcagctttgctggaggcctct
gtggttctgggagcgattctgggtggtggaactgaggaagaggttgctaaattaaggaaa
ttcgcccgaaacatcgggctgttgtttcaggttgttgatgacattcttgatgtcaccaaa
tcctccaaggaattggggaagacagctgggaaggatttgattgctgacaaggtgacttat
cctaagcttcttgggattcagaagtccagagagtttgctgagcagctgaacaaagaggct
caggctcagctctctggctttgatcaaggcaaggttgcccctttgatcgccttggccaat
tacattgcttaccgggagaactga
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