KEGG   Ipomoea nil (Japanese morning glory): 109170085
Entry
109170085         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
ini03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109170085
  09124 Replication and repair
   03420 Nucleotide excision repair
    109170085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109170085
   03400 DNA repair and recombination proteins [BR:ini03400]
    109170085
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109170085
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109170085
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zinc_ribbon_4 DNA_RNApol_7kD
Other DBs
NCBI-GeneID: 109170085
NCBI-ProteinID: XP_019174576
LinkDB
Position
Un
AA seq 114 aa
MSTMKFCCECNNILYPKEDKEQKILLYACRNCDHQEAADDNCVYRNEIHHSVGEQTQILH
DVTADPTLPRTKAVRCAACGHGEAVFFQATARGEEGMTLFFVCCNPNCGNRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaagttttgctgtgaatgcaacaacattctctacccaaaggaagacaaa
gagcagaagatcctcctctatgcatgtcgcaattgcgatcaccaggaggctgctgatgac
aactgtgtctatagaaatgagatacatcattctgttggtgagcaaacacaaatcttacac
gatgtaactgcagatccaacactacctcggacaaaagctgtgcgttgtgctgcatgtggt
catggagaggctgtattttttcaggcaactgctaggggagaagaaggaatgacactgttt
tttgtttgctgcaacccaaactgtggcaacaggtggagggactaa

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