KEGG   Ipomoea nil (Japanese morning glory): 109180900
Entry
109180900         CDS       T04663                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03020  RNA polymerase
ini03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109180900
  09124 Replication and repair
   03420 Nucleotide excision repair
    109180900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ini03021]
    109180900
   03400 DNA repair and recombination proteins [BR:ini03400]
    109180900
Transcription machinery [BR:ini03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109180900
  RNA polymerase III system
   RNA polymerase III
     109180900
  RNA polymerase I system
   RNA polymerase I
     109180900
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109180900
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Trypan_glycop
Other DBs
NCBI-GeneID: 109180900
NCBI-ProteinID: XP_019186157
LinkDB
Position
Un
AA seq 226 aa
MDMNGSPPMDMESLGQCLSSFIDDGTVESHRYYLSRRTVLEMLRDRGYAVPMAEIDISLQ
DFRDKYGQRPDIDRLKITALHKYDPDNKILAIFCGPSVIKVNIIRGILTQIVNKETLNRL
ILIVQSTLTNQAMKAVELFSCKVEIFQVKDLLVNITKHALKPKHQVLSDEEKQQLLQKYS
LEDKQLPRMSQKDAIARYFGLEKGQVVKVTYTGEIIETHVTYRCVW
NT seq 681 nt   +upstreamnt  +downstreamnt
atggacatgaatgggtcgccgccgatggacatggagagtttggggcagtgcttgagcagc
ttcattgacgacggaaccgtcgagagccaccgctattacctctctcggaggacggtgctg
gagatgctcagggatcgcggctatgccgtccccatggctgagattgatatttccctccaa
gatttccgcgacaaatacggccagagacccgacattgaccgccttaagataaccgctctc
cacaagtacgatcctgacaataagattctggccatattctgtggtccaagtgtgataaaa
gtaaatattatccgaggtattttaactcagatagtcaacaaggagaccttgaatcggctt
atactgattgtgcaaagcacactaaccaaccaagccatgaaagctgtggaactcttttcg
tgcaaagttgaaatcttccaggtcaaggacttgcttgtcaacatcacaaagcatgccttg
aagccaaagcatcaagtgctgtctgatgaagagaaacaacaattgttacagaaatacagc
ttggaagacaagcagctccctcggatgtcacagaaggacgcaattgcccgctactttgga
ctcgagaagggccaggttgtgaaggttacatacaccggtgagatcattgagacacatgtt
acatatcgctgtgtttggtga

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