Ipomoea nil (Japanese morning glory): 109188530
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Entry
109188530 CDS
T04663
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109188530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109188530
Enzymes [BR:
ini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109188530
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109188530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109188530
NCBI-ProteinID:
XP_019194732
LinkDB
All DBs
Position
Un
AA seq
1694 aa
AA seq
DB search
MLQAVEGASEAVEAVTFSFMTAKEVRRHSVVKVTNPNLLDLVGGPTPGGLYDPALGPSNE
GAECKSCGQRSFHCPGHCGHIDLVSPVYNPLLFDMLYNLLQRTCLFCFHFKASRREVENC
ASQLRLIAKGDIIGAKRLGEASSELGEEFSNDYIDSDPVDCEGSHMSGLTDDFGSQDHFD
HNKQQPNWDNFQFTEAMAVLNKFLRPKPVKCNKCKAKNPKISKPTFGWLHMDGIANTVLR
ENIIGGHKLEGWSTGGAKENITSEVVNDFETAETNSFPTTDGVENSMTPGSREDTVYHEL
EKQKRILSGPLLPSQVRDIIKLLWENEASICSFICDIQSQNLNKPDKVAGHSMFFLEAVL
VPPIKFRPPAKGGDSVMEHPHTVMLNKVLQSNIALGNAHVNTTERSKIINRWMELQQSVN
VLFDSKTAMAQGQKDVGTGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG
IPPYFALRLTYPERVTPWNVAKLRDAIINGPEIHPGAMSYSDRVSTFKLPPHRKMRVAVS
RKLPSSSGVVTQSGKNSEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGE
KTLRMHYANCSSYNADFDGDEMNVHFPQDEVSRAEAYNIVNANEQYIVPTKGDTVRGLIQ
DHIVSAVILTMKNTFLTLDEFNQLLYGSGVFMAGHGSFSGDRSRKVSTVDSESFLQPVLP
AVWKPKPLWTGKQVITAILNHLTRGFAPCTIRNKGKVPEKYFSKDKDNTADNKFIIWKNE
FVRGVLDKAQFGKFGLVHTVQELYGSNIAGVLLSAFSRLFTIFLQTHGFTCGLDDLIILP
DYDSRRKEHLEGNDVGEEVHANFVKFKPGEIGPVELQLEIEKVISTDKENAVAFLDMKMK
NKLNQKAENMDKDLLLKGLLRPFPKNCISLMTVTGAKGSTVNFQQISSYLGQQELEGKRV
PRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG
YLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGIDVHRTSFLKNFKALQKNEETIR
QKFHPARQFNSYIEKLPNGLEERVKKFWMERKAKLDKNSKKSLAKHVQEERFEKQVEQLT
ADKKKLASFLKLVEQKYLFSLVQAGEPVGVIAGQSVGEPSTQMTLNTFHLAGRGEMNVTL
GIPRLQEILMTASDVIKTPFLSCPFLGWTSRDDAQSLLAKVNKITVADMIESMEVHLLPI
SIHNNNISQVYKLIVKLKKHDFVSLKDCKYTLTSAFLRELEDAIENHLSLLSKISGIKNF
KSSAQSVASNETDENASGAKSQEDMADDDDGDEEDDRTEDLGSDAQKGKQQATDEMDYDD
GSDNELAEHDSSSEMKNDETDDVNSREEEAGDDDDDDDDDDDDDETELRESSKPKSSEEK
TDSPTKVKQKKEIFVKKESDRAIFVGTKGSSFTVHFRFTNEPHILLAQVAQKTAKKVYIK
SSGRIHQCRMVKFDVDENTVLWDGEKTEKAKKLQNNESKNAPFYWALKAAGVDFGAFWEL
QDELDVNRIYSNNIHAMLQTFGVEAARASLIREVKTVFGIYGVEIDFRHLSLIADYMTHN
GGYQPMSRHGRIADSLSPFLKMSFETASKFIVEAASHGMTDNLDAPSSRICLGLPVKMGT
GSFDLMQKLEIDAQ
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagcagttgagggtgcgtctgaggccgttgaggccgttactttcagtttcatg
acggccaaagaggtacggcgccacagcgtagtgaaggttaccaatccgaatcttcttgat
ttagtggggggtccaactccagggggtttatacgacccagccttgggtccttctaatgag
ggtgctgagtgcaaatcatgtggtcagcgttcatttcactgtccaggccactgtggtcat
attgatcttgtttctcccgtctacaatccattgctgtttgatatgctgtataatcttttg
caaagaacatgcctattttgctttcattttaaggcaagcaggagagaggttgagaactgt
gcctcccaattgagattaatagcaaaaggtgatattataggggccaaacgattaggcgaa
gcatcttcagaattgggtgaagaattttcaaatgactacattgatagtgatcctgtggac
tgtgagggaagccatatgtcaggccttactgatgattttggctcacaagatcattttgac
cataataaacagcagccaaattgggacaattttcagtttactgaagctatggcagtgttg
aataaatttctaaggccaaagcctgttaagtgcaacaaatgcaaagcaaaaaatcccaag
atcagtaaaccaacttttggatggcttcatatggatggcattgcaaacacagtccttcga
gaaaatattattggaggtcataagttggagggatggagcacaggtggagccaaagaaaat
attacttctgaggttgtgaatgactttgaaactgctgaaaccaactcattcccgactacg
gatggagtagaaaattctatgacccccgggagtcgtgaagatactgtgtatcatgagttg
gaaaagcagaaacgtattctttcaggacctcttttaccttctcaggtcagagatattata
aagctcttgtgggaaaatgaagcttctatctgctcttttatctgtgacattcaaagccag
aatcttaataaacctgacaaggtagcagggcactctatgttcttcttggaggctgttctt
gtcccgcctatcaaattccgtccacctgcgaaagggggagattctgtaatggagcatcca
catactgttatgttaaacaaggtccttcagtccaatatagccttggggaatgctcatgtt
aacactactgaacgttctaagatcatcaaccgatggatggaacttcaacaatctgtaaat
gttttatttgatagcaaaactgcaatggctcaaggtcaaaaagatgttggtactggcata
tgccaattgctggaaaagaaagagggtatcttccgccagaaaatgatggggaagagggtc
aattttgcatgccgatctgttatatctccagatccttatttggctgtcaatgaaattggt
atcccgccttattttgcactccggctaacttatccagagagagtgactccatggaatgtt
gccaaattgagggatgctattatcaatggccctgagatccatcctggagctatgtcatat
tctgatagagtatccacatttaagctgccaccacatagaaagatgcgtgtagcagtatct
cgaaaattgccttcttctagtggcgtggtaacacaatcagggaagaacagtgagtatgaa
tttgagggaaaagttgtataccggcacttgcaggatggggatattgtgcttgtcaatagg
cagccaacacttcacaaacccagcataatggcacacgtagttcgtgttttgaagggggag
aaaacgcttcgcatgcattatgctaattgcagctcttacaatgccgattttgatggtgat
gagatgaatgtccattttcctcaagatgaagtttctcgtgctgaagcctataacattgta
aatgctaatgaacaatacatcgttccaacaaagggagatactgttagaggcctgattcag
gatcatattgtaagtgctgtcattcttacaatgaagaatacatttttaactcttgatgag
ttcaaccaacttctctatgggtctggtgtgttcatggcgggccatggttcgttttctgga
gatcgttctcggaaagtttcaacggtagactctgagagttttctgcagcctgtattgcct
gctgtatggaaaccaaagcctctttggactgggaagcaggtcattactgcaattttaaac
catctgacaagaggtttcgcaccttgtaccatcagaaacaaagggaaagttccggagaaa
tacttctccaaagataaagataatactgctgataataagtttatcatttggaaaaatgag
tttgtacgtggtgttcttgacaaggcgcagtttgggaaatttggtttggtccacactgtt
caggagctgtatgggtcaaacattgcgggagtgttgctctctgcttttagtcgattattt
accattttcttgcagactcatggcttcacatgtggattggatgaccttataatattgcct
gactatgactccagaaggaaagagcatcttgaagggaatgatgttggtgaagaagttcat
gctaattttgttaagttcaaacctggagaaataggtcctgtagaactccagctggaaatt
gaaaaagttattagcacagataaagaaaatgctgtagctttcttggacatgaagatgaaa
aataaactgaaccaaaaagcagaaaacatggacaaagatttgcttctcaaaggattattg
agaccattccccaagaattgcatctctcttatgacagtcactggggctaagggtagtacg
gttaattttcaacaaatatcatcatatcttggccaacaagagttggaaggaaagcgagtg
cctcggatggtttctgggaagactttgccatgctttcccccctgggatttcactgccagg
gcaggaggctttatcactgaccgatttcttactggtctccgtcctcaggaatattacttt
cactgcatggctggtcgtgaaggattagtagatactgctgttaagacctctcgcagtgga
tatcttcagaggtgcttgataaaaaatcttgagagcctcaaagtttgttatgattatact
gtccgtgatgcagatggctcgatcatccaattttactatggtgaagatggtattgatgtg
catcgaactagctttctcaaaaacttcaaggcacttcaaaagaatgaagaaaccattcgt
caaaagtttcatcctgcacgccaattcaattcttatattgaaaaattgcctaatggactt
gaagaaagggtgaagaagttctggatggagaggaaggcaaagttagataaaaactcaaag
aagtcattagcaaagcatgtgcaagaggagcgttttgagaagcaagtggagcagctaact
gcagataaaaagaagctagcatcctttctcaaattagtagaacagaagtatttgtttagt
ctggtgcaagctggggaacctgtaggtgtaatagctggtcagtccgtaggtgaaccatca
actcagatgacacttaacactttccatcttgctggccgtggggaaatgaatgtcacactt
ggtattccacgtcttcaggagattttgatgacagcttctgatgtgattaagactcctttt
ttgtcctgtcccttccttgggtggacatcaagggatgatgcccagtcccttctagcaaaa
gtgaataagatcaccgtcgcagacatgattgagagcatggaagtccatctattgccgata
tcaattcacaacaataacatttctcaagtttacaaacttattgtgaagctcaaaaaacat
gattttgtctcgttgaaagattgcaagtataccctcacatctgcgtttttgagggagttg
gaggatgcaattgaaaatcatttgtccttgctttctaaaattagtggcataaaaaatttc
aaatccagtgctcagtcagttgcatcgaatgaaacagatgaaaatgcttccggtgccaaa
tctcaagaagatatggctgatgatgatgatggtgatgaggaggatgatagaactgaggat
cttggttctgatgcacaaaaaggaaaacagcaagctacagatgagatggattatgacgat
ggatctgacaatgagcttgctgaacatgattcatcgtctgaaatgaaaaatgatgagact
gatgatgtcaatagtagggaggaggaagctggagatgatgatgatgatgatgatgatgat
gatgatgatgatgaaactgaactgagagaatcatcaaagcctaaatcaagtgaggaaaag
accgattcaccaactaaagtaaagcaaaaaaaggaaatctttgtgaaaaaggaatctgac
agggctatttttgtgggaacaaaagggtcaagctttacggtccatttcagatttacaaat
gaacctcatattttactagcacaggtggctcagaagactgcaaagaaagtttacataaag
agttctgggaggatccatcagtgcagaatggttaaatttgatgtggatgaaaatacggta
ctttgggatggggagaaaacggagaaagccaagaagcttcagaacaatgaaagcaaaaac
gctcccttttattgggcactgaaagctgctggagtggattttggtgcattttgggaattg
caggatgaacttgatgtgaatcgaatatacagcaataatatccatgccatgctgcaaaca
tttggggtcgaggctgccagggcaagtctcatcagagaggtgaagactgtgtttggtatt
tatggtgttgagattgattttcggcacttaagcctgattgcagactacatgacccacaat
ggtggctaccaaccaatgagcagacatggaagaatagctgattcattgtcaccctttttg
aagatgtcttttgaaaccgcgtcgaaatttatagtagaagcagcatctcatggtatgacc
gacaacttggatgcaccatcttccagaatatgccttggcttacccgtcaaaatgggtact
ggttcttttgacttgatgcaaaagttggaaattgatgcacaataa
DBGET
integrated database retrieval system
