Ipomoea nil (Japanese morning glory): 109191882
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Entry
109191882 CDS
T04663
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109191882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109191882
Enzymes [BR:
ini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109191882
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109191882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
109191882
NCBI-ProteinID:
XP_019198100
LinkDB
All DBs
Position
Un
AA seq
1387 aa
AA seq
DB search
MMMRKREEMQFTKQPYIEDVGPRKIKSIQFSTFSGSEVMKSAEVEVYRGVYYDASKNPIL
NGLLDPRMGPPNKTKSCATCNGDFKECPGHYGYLNLALPVFNVGYLPIIVDILKCICKGC
SRILLGEKERLDFLRKMRNTKLEHLKKNELFKRVVKRCTAMTSGRKAVICSRCGCVNGMV
KKGPLKIIHEYGSQFLDECHNAVSNKTKGSITVPPELDSKTVHSLFKKMIDEDCELLYLS
DKPEKLLVTSIPVPPIAIRPSVFVDGGMQSNENDITERLKRIIQANSSLRQEISDTTLPA
RSLASWVDLQMEVAQYINSDVRGLPPQMQASRPLSGFVQRLKGKQGRFRGNLSGKRVEYT
GRTVISPDPNLKITEVAIPILMARILTFPERVSRHNIEKLRQCVRNGPNKYPGAKYIKHP
DGTEISLMYSSRKRHADELKYGYIVDRHLEDGDAVLFNRQPSLHRMSIMCHRARIMPWRT
LRFNESVCNPYNADFDGDEMNMHVPQTVEARTEALLLMGVQNNLCTPKNGEILVASTQDF
LTSSFLITRKDTFYDRASFSLMCSYMGDAMDHIDLPTPALIKPVELWTGKQLFGVLLRPY
SKMRVYVNLTLQEKSYHDKKGLETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSV
LLRDYNAHGAAICMNRLAKLSARWIGNHGFSIGIDDVQPRKELVEKKTMEIEKGYGTCET
YIASFNKGELELQPGCDAAQTLEANITKELNGIRVKTGRVCTDTLHWRNSPLIMYQCGSK
GSDLNISQMIACVGQQSVGGCRAPNGFIDRSLPHFPTKSKFPAAKGFVASSFYDGLSATE
FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSILYDRTVRNASSCIVQFEYGDDG
MDPAQMEEKKGHPLNFNRLFMKVKATCPPGEEKSLSSSEIQQVVHRRLSEHDMTPDGGCS
KAFCESLKQFIENNCVASLEKTRKDLKLDGEHNAGEDLDALESIALNISGVTRKQLQVFL
EICISRYHAKKLEDGTSIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRLKEIIN
GAKRISTPFIKAKLSCDDDLAFARMVKGRIEKTLLGQVAKGIEIVMAARVASIVIVLDME
AIQTSYLSIDAYIVKESILQTKKLKLKEQHIRVLDRRKLEVIPHADRSKLHFELHRLKNK
LPGVVVKGINTVECAVIKKGKKGNYKLPVEGTGLLAVMGTAGVDGRNTTSNHIMEVNQVL
GIEAARSCIIHEIRKTMSKHGMTIDLRHMMLLADLMTFKGEVLGITRFGMQKMKDSVLTL
ASFEKTADHLFNASVSGRDDKIEGVGECIIMGIPMQMGTGMFKVMQSNTSHPVELNYGKE
SIIPRDD
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggaaaagagaagaaatgcagttcaccaagcagccttacattgaagatgtg
ggccctcggaaaataaaaagtattcagttttcaactttctctggttctgaagtaatgaaa
tcagctgaagttgaagtctatcgtggagtttactatgatgcttccaagaatcctattctc
aatggcctattagaccctcgcatgggccctccaaacaagaccaaatcttgtgcaacatgc
aatggagatttcaaagaatgtcctggtcactatggatacttgaatcttgctttaccagtt
tttaatgttggatatctacccatcattgtggacatcttgaaatgcatttgcaagggttgt
tcccgcattcttcttggtgaaaaagaacgtctagacttcctacgaaagatgagaaataca
aagttggagcatttgaaaaagaatgagttgttcaaaagagttgtgaaaaggtgcactgcc
atgacaagtggtcgcaaggcagtgatttgttccagatgtggatgcgtaaatggaatggtg
aaaaagggccctttgaagatcatccatgaatatggaagtcagtttttagatgagtgccat
aatgctgtttcaaacaaaaccaagggatctattactgtgcctccagaactcgactcaaag
acagttcactccctcttcaagaaaatgatagatgaggactgtgagttgctttaccttagt
gacaaaccagaaaaactccttgtcacaagtatccctgtgccaccaatagcaatacgccct
tcagtctttgtggatggtggaatgcagagtaatgagaatgacatcacagagaggctgaag
cgcattatccaagcaaattcaagtcttcgacaagaaatttccgatacaactcttccagct
agaagtctggctagctgggttgatctccaaatggaagttgcacagtacataaatagtgat
gtacgtggattgccaccacaaatgcaagcttccaggccactaagtggctttgttcagcgc
ctcaaaggaaagcaaggtcgtttccgtggaaatctgtcaggcaagcgtgttgaatatact
ggacgcactgttatttcacccgatccaaatcttaaaatcactgaggtagcaattcctatc
ttaatggctcgaattttaacatttcctgagcgtgtttcacgacacaacatagagaagttg
aggcaatgtgttcgcaatgggcccaacaaataccctggtgcgaagtatatcaagcatcct
gatggtaccgagatttcgttaatgtactctagtagaaagcgtcatgctgatgaattgaaa
tatggctacatagttgatcgtcatttggaagatggagatgctgttctatttaatagacaa
ccaagtttacatcgaatgtctatcatgtgccatcgggcaaggattatgccatggcgcaca
ttgagatttaatgaatctgtttgcaatccctacaacgctgattttgatggtgatgagatg
aatatgcatgtaccacaaacagtagaggcgcgcacagaggctcttttgttgatgggggtc
caaaacaatttatgcaccccaaagaatggagaaatcttggttgcttctacacaggatttt
ctaacatcttcctttctcattacaaggaaggacacattttacgatcgtgcttcgttttca
cttatgtgttcatacatgggcgatgcgatggatcacattgatttgccaactccagcttta
attaagccagttgagctttggactggaaaacagttatttggtgtgcttctacgtccatat
agtaaaatgagagtctacgtaaaccttactcttcaggagaagagttaccacgacaaaaaa
ggtctagagacaatgtgcccaagtgatgggtttgtttacttccgcaacagtgagctgata
agtgggcaacttggaaaggccacactaggaaatggaaacaaggatggactttattctgtg
ctgctaagggactataacgcacatggtgctgcaatatgtatgaatcggcttgcaaagttg
agtgctcgttggatagggaatcatggattttcaattggcatcgatgatgtccaaccaaga
aaggagttagttgaaaagaagacaatggaaatagagaaggggtatgggacatgtgaaacg
tatatagcttcatttaacaagggggaacttgagcttcaacctggctgtgatgctgcacag
acacttgaagccaatataacaaaggaactgaatggtatccgagtgaaaactgggcgagtg
tgtactgatacactacattggaggaatagccccttaattatgtatcaatgtggttcaaaa
ggctcagatctcaatattagtcagatgattgcatgtgtcggccagcaatctgttgggggt
tgtcgtgctccaaatggattcattgaccggagtcttcctcattttcctacaaaatcaaaa
tttccagctgctaaaggatttgtcgccagttcattttatgatggtttaagtgctactgag
ttttttttccacactatgggtggaagagaaggccttgtagacacagcggttaaaactgct
gacacagggtatatgtctcggaggcttatgaaggctctggaggatctttcaattttgtac
gacagaaccgtgagaaatgcaagttcatgcatagtgcaatttgagtatggtgatgatggt
atggaccctgcacagatggaagagaaaaaagggcatcctctgaactttaatagattattt
atgaaagttaaggcaacatgtcctcctggagaggaaaagagtctgtcatcatcagaaatc
caacaggtggtgcatagaaggctttcagaacatgatatgactccagatggggggtgctca
aaggccttctgcgaatcattaaaacaattcattgaaaacaactgtgtagcaagcttagag
aaaacacggaaagatctgaaacttgatggggaacataatgcaggggaggatcttgatgct
cttgaaagtatcgctttaaatatatcaggtgtaacaagaaagcaactacaggttttccta
gagatctgcatctctcgttatcatgcaaagaaattagaagacggaacttcaatcggtgca
ataggagctcagagcattggagaaccagggacgcagatgacattaaaaactttccacttt
gctggtgttgcaagcatgaatgttacacttggtgttcctcgcttaaaagaaattataaat
ggagccaaaaggatcagcacaccgtttattaaagcaaaactttcatgtgatgatgatcta
gcttttgctagaatggtaaagggtcgtattgaaaaaactcttcttggtcaggttgccaag
ggtattgagatagtgatggctgcgagagtagcatccatagttatagtgcttgatatggaa
gcaattcaaacttcatatctttccatagatgcttatattgttaaggaatcaattttgcag
actaaaaaattgaagttgaaggaacagcacatcagggttttagatcgtagaaagctggaa
gttatccctcatgctgatcgaagtaaacttcattttgaactccaccgtctcaaaaataag
cttcccggggttgttgtgaagggtatcaacactgttgaatgtgctgtgatcaagaaaggc
aaaaagggaaactacaaattgcctgtggaagggactggtcttctagctgttatgggcaca
gctggagttgatggacgtaatacaacaagcaatcacatcatggaagtgaatcaagtactt
ggaattgaagccgcaagaagttgtataattcatgagattaggaaaaccatgtcaaaacat
ggaatgactatagatttacgtcacatgatgcttctagcagatctaatgacttttaagggt
gaagtattaggaattactagatttggtatgcagaagatgaaagacagtgtattgacttta
gcttcctttgagaagactgctgatcaccttttcaatgcttctgtaagtgggcgggatgac
aaaattgaaggagtcggtgaatgcatcattatgggcattccaatgcagatgggcacaggg
atgtttaaggttatgcaaagcaacacttctcatccagttgagctgaattatggaaaagaa
tcaattatccccagagacgactag
DBGET
integrated database retrieval system
