Iodobacter ciconiae: EJO50_08490
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Entry
EJO50_08490 CDS
T05767
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
iod
Iodobacter ciconiae
Pathway
iod00906
Carotenoid biosynthesis
iod01100
Metabolic pathways
iod01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EJO50_08490 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
iod01006
]
EJO50_08490 (hpnD)
Enzymes [BR:
iod01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
EJO50_08490 (hpnD)
Prenyltransferases [BR:
iod01006
]
Terpene biosynthesis
Squalene/phytoene synthase
EJO50_08490 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AZN36529
UniProt:
A0A3S8ZST8
LinkDB
All DBs
Position
complement(1928924..1929760)
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AA seq
278 aa
AA seq
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MTPEQYCEDKAAKSGSSFYYSFRFLPLGQRKAITALYAFCREVDDVVDECHEESVARTKL
AWWRSEIDQLFAGSPQHPVTQALLPSLKKYDLQRELFIEIIDGMEMDLDMARYNSFKDLQ
LYCYRVASVVGQMAAQIFGFTDRGTLKYAHDLGLAFQLTNIIRDVGEDARRGRIYLPVTE
LQQFNVPAADILACRETPEFRVLMDFQIKRAEQYYAQAIDALPAVDKKQQRTGLVMAAIY
RATLKEIEKDGVGKVLNQRISLTPIRKLWLAWKTWWLC
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctgagcaatattgtgaagataaagcggctaaaagcggctccagtttttattac
agttttcgttttttacctttagggcaaagaaaagcgattacggccttatacgcattttgt
cgtgaagttgatgatgtggttgatgaatgccatgaagaaagtgtggcaagaactaaattg
gcctggtggcgtagtgaaattgatcagctatttgctggctcacctcagcacccggtgacc
caggctttattaccttctcttaaaaaatacgatttacaacgcgagctatttatagaaatc
atcgatggaatggagatggatctggatatggctcgttataatagctttaaagatttgcaa
ttatattgctatcgtgtggcatcggttgtcgggcaaatggccgcgcaaatttttggcttt
acagatcgcggcacacttaaatatgcacatgatctgggtttggcatttcaattaaccaat
attattcgtgatgttggagaagatgcccgccgcggccggatttatttgccggtgactgaa
ttgcagcaatttaatgtacctgccgcagatattctggcttgccgtgaaacgcctgaattt
agagtattaatggattttcaaattaagcgcgcggagcaatattatgcgcaggccattgac
gcattgcctgccgtagataaaaaacagcagcgcacaggcttggtaatggcggcaatttat
cgggcgacattgaaagaaattgaaaaagatggtgtaggtaaagtgttaaatcagcggatt
tctttaacacctattcgtaaattatggctggcgtggaaaacgtggtggctgtgttaa
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