Ignicoccus pacificus: IPA_00165
Help
Entry
IPA_00165 CDS
T08506
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
ipc
Ignicoccus pacificus
Pathway
ipc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPA_00165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipc03021
]
IPA_00165
Enzymes [BR:
ipc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPA_00165
Transcription machinery [BR:
ipc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
IPA_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpa2_4
zf-UBP
Motif
Other DBs
NCBI-ProteinID:
UXD21101
UniProt:
A0A977KA38
LinkDB
All DBs
Position
24435..27839
Genome browser
AA seq
1134 aa
AA seq
DB search
MIGMSSAQQFPTVEDRWTVINAFFKEKGLVRQQLESFNKFVTETLQKLIDEIGEVELLEG
YKIEFGKVRYGKPLVKEPDGINEEITPTECRIRDLTYAAPIYVYMRLRGPRGDIIDEGEV
EIGQMPIMLRSILDPLSKMSPEELIEAGEDPRDPGGYFIVEGSERVVVTQEDLALNKVLV
DKGGPQTTVTHTAKVLSSTLGYRVQVIVERQKDGTLHAIFPPLPGKIPFIVLMRALGIES
DKDITSMVSLDPDIQQELLSSIEQAAAMPTVEDALDFIGARIAVGLPRDKRIERAQQLLD
NNLLPHLGTTPEARLKKAIFLAHMARKLLEVYLERREPDDKDHYANRRLKLTGDLMAALF
RTNLRAMLKDITYQLERSTSRGGERLKLRILIRPNYLGDKVRQALATGNWVGGRTGVSQL
LDRTNWLSTLSHLRRVVSPLSRTQPHYEARELHMTQWGRICPFETPEGPNIGLVKNLALS
AYISVGVPEEEIEEVLKELGMVPVEDVVDAIRNEQPIPEEAITGARVYLNGRPVGYYHDA
HELAQKLRKLRREGKIHFEVGVGVYENDDGSIKEVYVNTDPGRVLRPVFVVENGELKLKP
EHVEKLRSGEWTFRDLLVRGIVELLDADEEENAYIALNPEDVTPEHTHMEIWIPAIFGVA
ASTIPYLEHNQSPRNSYQSAMAKQALGLYAANFMLRSDTRGYLLHYPERPLAQTRHLDVI
GYNHRPAGQNAIAAIMSYTGYNIEDAIIMNKSSVDRGFMRATFFRLYQTEEQKYPGGQED
RIEVPRPELKVRGFRGPEAYKKLDEDGLVQPETYVVGGEVIIGKTSPPRFTDEYKEMGIV
ETARRDTSIAVRHGEEGVVDTVVVTQNIDGVKMIKIKVRDLRIPEIGDKFASRHGQKGVA
SILLPQYDMPYSEFGMVPDVILNPHAFPSRMTLGQLIESIASKAASFRGREVDATPFYKE
PLDPLREILVKRGFPPDGTEVMFDGRTGEMVARPVFIGVVFYQRLYHMVADKIHARARGP
VQILTRQPTEGRTRKGGLRFGEMERDVLVAHGVAQLLVERLLKSSDATRVWVCAKCGHIG
WWDAFRGKPVCPIHGDEGEMYQIEISYAFKLLLQEIMSMVIMPRLRLGDRFSKI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
gtgataggaatgagcagtgctcagcaattccccacggttgaggatcgttggaccgtaata
aatgccttcttcaaggagaagggattggtaagacagcagctagagtcatttaacaagttc
gttactgaaacactacagaagctcatcgatgagataggagaagtagagctcttggaaggt
tacaaaatagagttcgggaaggtaaggtatggtaagcccttggtcaaggaaccggatgga
ataaacgaggagataacgcccactgagtgcagaataagggacttgacctacgcggctccc
atatacgtttacatgagactcagaggccccagaggagacataatagatgagggtgaagta
gagataggccagatgccgataatgctaaggtcgattctagaccctctctccaagatgagt
cctgaagagctcatagaggctggagaagatccgagggatcccggagggtacttcatcgtt
gagggtagcgaaagggtcgtggtgacccaagaggatctagctctaaacaaggtattggtt
gacaagggaggtccccagacgacggtcactcatacagcaaaggtgctttcgagcacccta
ggatatagggtacaagtgatcgtagaaagacagaaagatggtactctccatgccatattc
ccccctctacccggcaagataccattcatcgtcctaatgagggcccttggaatagagtcg
gacaaagacataacttccatggtaagcctagatccagacattcaacaagagctcctctcc
tctatagagcaagccgctgctatgcccaccgtagaggatgctttggatttcataggagcg
aggatagcggtaggattgcctagggataagagaatagagagggctcagcagctattggac
aataacttgttacctcacctaggaaccacgccggaggcgagactgaagaaagccatattc
ttggctcatatggctaggaagctattagaagtataccttgagaggagagagcccgacgac
aaggaccattacgctaacagaagactaaagctgactggagatctaatggcagctctcttc
agaactaacctaagagcaatgttgaaagatattacttaccagctagagagatctacgagt
agaggaggagagagactcaagctaagaatattgataaggcctaattaccttggtgataag
gtaagacaagcgctagctaccggtaactgggtcggtggaagaaccggcgtctctcagctc
ttggataggaccaactggttaagcacgctttcacacttgagaagggtcgtgtcacctctg
tccagaactcagcctcactacgaggcaagagagctccacatgacccaatggggaaggata
tgtcccttcgagactccagaaggacccaacatcggtctagtcaagaacctagctctctcc
gcttacatctccgtgggagtacctgaagaagagatagaggaagtcctcaaggagctcggg
atggtgccagtggaggacgtggtcgatgcaataaggaatgaacaaccgattccagaggaa
gcgatcaccggagctagggtttacttgaacggaaggcccgtaggatattaccatgacgct
cacgagctagctcagaagcttagaaagctgagaagggaagggaagattcacttcgaggta
ggtgtgggcgtctacgagaacgacgacggcagcatcaaggaggtttatgtaaataccgac
cccgggagggtgttaagaccggtctttgtcgttgagaacggagagctcaagctgaagcca
gaacacgttgagaagctcaggagcggtgagtggacattcagagacttgctagtgagagga
atagtggaactattggatgcagatgaggaagagaatgcctacatagcactaaaccccgag
gacgtgactccagagcatacacatatggagatatggataccagcgatcttcggcgtagcg
gcctcgacgataccttacttggagcacaaccaaagcccgagaaacagctaccagagcgca
atggccaagcaagcgctaggactctacgccgctaacttcatgctaaggagtgatactaga
ggatacttgcttcactatccagagagaccattggctcaaactaggcacttggacgtaata
ggttacaaccacagaccagctggacaaaacgctatagctgcgataatgtcctacactggc
tacaacatagaggacgccataataatgaataaatcaagcgttgacagaggtttcatgaga
gctaccttcttcagattgtatcagacggaggaacagaagtacccaggaggacaagaggac
agaatcgaagttcccagaccagagcttaaggtaaggggcttcagaggcccggaggcgtat
aagaaactagacgaggatggattggttcagccggagacctacgtggtgggaggagaggtc
atcattggaaaaactagcccgcctagatttaccgatgagtacaaggaaatgggaatagtt
gagactgccagaagggatacctcaatagcggtaaggcacggcgaagagggagtagtggat
accgttgtggttactcaaaacatagatggtgttaagatgataaagatcaaggtaagggac
ttgagaataccggagataggagataagttcgcatcaagacatggtcagaagggagtagcg
agcatcctcttgccccagtatgacatgccctactcggagtttggaatggtaccagatgtc
atactgaatccccacgcgttcccatcaagaatgacactgggacaactgatcgagagcatt
gcttccaaggcagcctccttcagaggaagagaggtagacgctacgccgttctacaaagaa
ccattagatcctctgagagagatacttgtcaagagaggattcccaccggacggaactgaa
gtgatgttcgacggaaggaccggagagatggtggccagacccgtcttcataggagttgtc
ttctatcagagactctaccacatggtggccgataagatccacgctagagctagaggacca
gtccagatactgacgagacagcccaccgaaggcaggacgaggaagggaggtctgaggttc
ggagagatggagagagacgtcttggtggcccacggagtagcacagctcctcgtagagagg
cttctgaagagcagcgacgcgactagagtttgggtctgtgccaagtgcggtcacatagga
tggtgggatgcgttcagaggtaagccggtatgccctattcacggcgatgaaggtgagatg
tatcaaatagagataagctacgcgttcaagctattgctacaagagataatgagcatggtg
ataatgcccaggctaagactcggagacagattcagtaagatctga
DBGET
integrated database retrieval system
