Ignicoccus pacificus: IPA_08580
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Entry
IPA_08580 CDS
T08506
Name
(GenBank) DNA-directed RNA polymerase subunit M
KO
K03057
transcription factor S
Organism
ipc
Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:
ipc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipc03021
]
IPA_08580
Transcription machinery [BR:
ipc03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
IPA_08580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_C
RNA_POL_M_15KD
Zn_Tnp_IS1595
TF_Zn_Ribbon
zinc_ribbon_2
zf-ribbon_3
zf-TFIIB
CPxCG_zf
OrfB_Zn_ribbon
DZR
zinc_ribbon_4
RUBY_RBDX
Nudix_N_2
Lar_restr_allev
TackOD1
zf-C4_Topoisom
Ogr_Delta
Baculo_LEF5_C
IBR
Med16_C
FdhE
GpA_ATPase
HypA
LysW-like_globular
DNA_ligase_ZBD
Cys_rich_CPCC
COX5B
Zn_ribbon_recom
Gmx_para_CXXCG
zinc_ribbon_9
DUF4379
Ribosomal_L37ae
DUF951
Motif
Other DBs
NCBI-ProteinID:
UXD21827
UniProt:
A0A977PKB2
LinkDB
All DBs
Position
complement(1470918..1471259)
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AA seq
113 aa
AA seq
DB search
MVQFCPKCGSLMVARRVGGKTILKCMRCGYEMDASQAKPIRTTKKISHSVREKTIVIDDK
IKVETLPKTRDVICPKCGHDEAYYWFLQTRAGDEPPTRFYKCTKCGHVWREYE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagttctgccccaagtgtggttcgttaatggttgcgaggagggttggagggaag
actatcctaaagtgcatgagatgcggctatgagatggatgcctctcaggctaagcctata
agaactactaagaagataagccacagcgtaagggaaaagacaatagttattgacgataag
ataaaggtagagaccttaccaaagacaagagacgtaatttgtcctaaatgcggacatgat
gaagcctactactggttcctccaaaccagagcgggagacgaacctcccaccaggttctac
aagtgcacgaagtgtggtcacgtatggagggagtacgagtaa
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