KEGG   Ignicoccus pacificus: IPA_08580
Entry
IPA_08580         CDS       T08506                                 
Name
(GenBank) DNA-directed RNA polymerase subunit M
  KO
K03057  transcription factor S
Organism
ipc  Ignicoccus pacificus
Brite
KEGG Orthology (KO) [BR:ipc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipc03021]
    IPA_08580
Transcription machinery [BR:ipc03021]
 Prokaryotic type
  Archaeal type
   Basal transcription factors
    TFS
     IPA_08580
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_Tnp_IS1595 TF_Zn_Ribbon zinc_ribbon_2 zf-ribbon_3 zf-TFIIB CPxCG_zf OrfB_Zn_ribbon DZR zinc_ribbon_4 RUBY_RBDX Nudix_N_2 Lar_restr_allev TackOD1 zf-C4_Topoisom Ogr_Delta Baculo_LEF5_C IBR Med16_C FdhE GpA_ATPase HypA LysW-like_globular DNA_ligase_ZBD Cys_rich_CPCC COX5B Zn_ribbon_recom Gmx_para_CXXCG zinc_ribbon_9 DUF4379 Ribosomal_L37ae DUF951
Other DBs
NCBI-ProteinID: UXD21827
UniProt: A0A977PKB2
LinkDB
Position
complement(1470918..1471259)
AA seq 113 aa
MVQFCPKCGSLMVARRVGGKTILKCMRCGYEMDASQAKPIRTTKKISHSVREKTIVIDDK
IKVETLPKTRDVICPKCGHDEAYYWFLQTRAGDEPPTRFYKCTKCGHVWREYE
NT seq 342 nt   +upstreamnt  +downstreamnt
atggtgcagttctgccccaagtgtggttcgttaatggttgcgaggagggttggagggaag
actatcctaaagtgcatgagatgcggctatgagatggatgcctctcaggctaagcctata
agaactactaagaagataagccacagcgtaagggaaaagacaatagttattgacgataag
ataaaggtagagaccttaccaaagacaagagacgtaatttgtcctaaatgcggacatgat
gaagcctactactggttcctccaaaccagagcgggagacgaacctcccaccaggttctac
aagtgcacgaagtgtggtcacgtatggagggagtacgagtaa

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