KEGG   Ictalurus punctatus (channel catfish): 100304978
Entry
100304978         CDS       T04658                                 
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule precursor
  KO
K06454  T-cell surface glycoprotein CD4
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03250  Viral life cycle - HIV-1
ipu03260  Virion - Human immunodeficiency virus
ipu04060  Cytokine-cytokine receptor interaction
ipu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100304978 (cd4-1)
   03260 Virion - Human immunodeficiency virus
    100304978 (cd4-1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100304978 (cd4-1)
   04514 Cell adhesion molecules
    100304978 (cd4-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ipu04090]
    100304978 (cd4-1)
CD molecules [BR:ipu04090]
 Proteins
  100304978 (cd4-1)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 V-set V-set_CD47 TM_ErbB1 Orf78 Adeno_E3_CR1 Protocadherin FeoB_associated EphA2_TM
Other DBs
NCBI-GeneID: 100304978
NCBI-ProteinID: NP_001187155
Ensembl: ENSIPUG00000006367
UniProt: Q1W651
LinkDB
Position
1:complement(11384104..11408614)
AA seq 471 aa
MSFLLGLLLLLAPCHSAADEPKGIFAQFGNSVTLPRRIWGIEGKIHVNWYFQDNLLISRN
PTLSASKTVHNRFSLSSDSSLIISNVEKSDFGIFKCEQHHLVETITDTYKLYEVMMSTPP
PLLVGASLDLSCEIESEGFKLVHEIKWFGPDNTLYVGSSSSNQRTLRVTKVSSIHSGKWT
CAVRYGASITLKARTDVIIVDLASSSPDPIYTSDSSINFLIPCSLSSKIPWSTVNATGVT
GGSWHFTPFKSSESSLPLLKLQLNPSPAWKFPSGTHTLLMETDLKNHELGVKISKVSINE
RGNYTCSLEFGSRTLSRSVQVEVLQVISSEGKVIYEGNTVNLTCTLGHHMTPDLEVNWIP
PYGSSLSKLSPPYTTMLSIPGVSVKDSGRWTCQLKKNATLLTSATISLKIEKAPVNIWLV
VAIIGGLLVFILIAVITVFIIRRHRQMMRYRCRKGRVCCCKNPKPKGFYKT
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagcttcttattggggttattgcttcttctggctccatgtcactcagctgcagatgaa
ccaaaggggatttttgcacagttcggaaactctgttactcttcccaggaggatatggggg
atagaaggcaaaattcatgtcaactggtacttccaggataacttactaattagtaggaat
cctacattatccgcttcaaaaacagtgcacaaccgattctctctttcatcagactcatct
cttatyatttctaatgttgaaaagtctgactttggaattttcaaatgtgaacagcatcac
cttgtggaaactattacagacacatataaactttatgaagtaatgatgtctacaccgcca
ccactgctggttggtgccagtctcgatctgtcctgtgaaattgaaagtgaaggatttaaa
cttgttcatgaaataaaatggttcgggcctgataatacattgtatgtcggatcatcttct
tcgaaccaacgcactctcagggtraccaaagtctccagcattcacagtggaaagtggacc
tgtgcagtgcggtatggtgctagcatcacattaaaggccagaacagatgtcatcattgta
gatctcgcctcctcttcaccggatcccatctatacatctgactcctccattaatttcctt
atcccytgttccttatcctcaaaaattccctggtccacagtgaatgccacaggtgtgacg
ggaggtagctggcatttcactccatttaaatcttctgaatcctcgctccctctcctcaaa
ttacaactcaatccctcccctgcctggaagttccccagtggcacacacaccttgctcatg
gagactgatttgaaaaatcatgaactcggtgtgaagatttccaaggtgtctataaatgaa
agggggaactacacctgcagtctcgagttcgggtcaagaacactcagcaggagcgtgcag
gtagaggtgctgcaagttatttcttcagaaggtaaagttatatatgagggtaacacagtg
aacttgacctgcacgctgggtcatcacatgacccctgacctggaagtgaactggatacct
ccctatggttcatctctgtcaaaactcagccctccttataccacaatgctgtctatccct
ggagtaagtgtgaaggacagcgggcgatggacatgtcaactcaaaaagaatgcaacattg
cttacatcagctacaatcagtttgaaaatagagaaagctccagtgaatatttggcttgtt
gtagctattattggtggtcttctggtcttcatcttgattgctgtaataactgtcttcatc
attcgtaggcacagacagatgatgaggtatagatgccgtaaggggagagtctgctgctgt
aagaatcccaagcccaaaggtttctacaagacctga

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