Ictalurus punctatus (channel catfish): 100528419
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Entry
100528419 CDS
T04658
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03020
RNA polymerase
ipu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100528419 (polr2i)
09124 Replication and repair
03420 Nucleotide excision repair
100528419 (polr2i)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
100528419 (polr2i)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100528419 (polr2i)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
100528419 (polr2i)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100528419 (polr2i)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_POL_M_15KD
TFIIS_C
Ogr_Delta
Zn_ribbon_recom
TF_Zn_Ribbon
Zn_Tnp_IS1595
DZR
Lar_restr_allev
zf-C4_Topoisom
GpA_ATPase
Motif
Other DBs
NCBI-GeneID:
100528419
NCBI-ProteinID:
NP_001187618
Ensembl:
ENSIPUG00000001127
UniProt:
E3TF07
LinkDB
All DBs
Position
4:complement(22323658..22328453)
Genome browser
AA seq
126 aa
AA seq
DB search
MDLEGGACEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYRQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaaggcggcgcgtgtgagcccgggttcgtcgggatccggttttgtcaggaa
tgtaacaacatgctgtatccaaaagaggacaaagagaaccgcatcctcctctatgcttgt
aggaactgtgattatcggcaggaagccgataacagctgcatctacgtgaacaaaatcaca
cacgaagttgacgagctcacacagataattgctgatgtgtctcaagacccaacgctgcct
cgtaccgaagatcatccatgccctaaatgtggccacaaggaggcggtgttcttccagtca
cacagcatgaaggctgaggatgcaatgaggctgtactacgtgtgtacggctccacactgt
ggacacaggtggacagagtga
DBGET
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