Ictalurus punctatus (channel catfish): 100529012
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Entry
100529012 CDS
T04658
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
ipu03420
Nucleotide excision repair
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100529012 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
100529012 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100529012 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
100529012 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
100529012 (cdk7)
03019 Messenger RNA biogenesis [BR:
ipu03019
]
100529012 (cdk7)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
100529012 (cdk7)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
100529012 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
100529012 (cdk7)
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: CMGC group
CDK family
100529012 (cdk7)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100529012 (cdk7)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
100529012 (cdk7)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100529012 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
100529012
NCBI-ProteinID:
NP_001188211
Ensembl:
ENSIPUG00000019436
UniProt:
E3TG08
LinkDB
All DBs
Position
22:6548225..6564795
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYEARDKTKNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNVSLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYLHHYWILHRDLKPNNLLLDESGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TSLPDYVSFKLFPGTPLEHIFSAASDDLLELLKGLFTFNPCTRLTATKALKMQYFSQKPA
PTPGPQLPRPNCSAEALKEKENLAIGIKRKRDVIEQGTLKKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctttggatgtcaagtccagagctaaacgatatgaaaagctggactttctcggagag
ggtcagtttgccacggtttacgaggcgagagacaaaacaaaaaataccattgttgcgatt
aaaaagattaaagtcggacacagaacagaggcaaaagatggaatcaacagaacagccctg
agagaaatcaaactgctgcaggaactgagtcatccaaatattattggactcctcgatgcg
ttcggacacaaatccaacgttagcctcgtgtttgactacatggagactgaccttgaggtt
atcataaaggacacgagtcttgtactgactccagccaacattaaagcctacatcctgatg
acactgcagggtctggagtacttgcaccattactggatcctacacagggatttgaagcca
aataatttactactggatgaatccggggtgctgaaacttgctgattttggattggcaaag
gcctttggaagtcctaacagagtttatacacatcaagtcgtgaccagatggtaccgttct
ccagagctgctcttcggggccaggatgtatggggttggtgtggacatgtgggcagtgggc
tgcatccttgcagaactcctactccgagttccctttctggctggagattctgacctggat
cagctgacaaagatatttgaagcgctggggactccaacagaagagacttggcctgggatg
accagtctcccagattacgtctcatttaaactgtttcccggcacacctttggagcacatt
ttcagtgcggcaagcgatgaccttctggagctcctgaagggcctgtttactttcaacccc
tgcacccgcctcacagccacaaaggcattgaagatgcaatatttcagccagaaaccagcg
cccaccccaggccctcagcttccccggccaaactgttcagcggaagctctaaaagaaaaa
gaaaatctcgccattggcattaaaagaaaacgtgacgttatcgaacaaggcaccctgaag
aagaagttggtgttttag
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integrated database retrieval system
