Ictalurus punctatus (channel catfish): 108256105
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Entry
108256105 CDS
T04658
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108256105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108256105
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108256105
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108256105
NCBI-ProteinID:
XP_017308146
Ensembl:
ENSIPUG00000016357
UniProt:
W5U873
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Position
23:complement(9210331..9217342)
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AA seq
521 aa
AA seq
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MKLVFYLLPVLLSFFLSGCSGRNEEERLINHLIKERGYNKELRPVQNKDEAVMIYLSLML
SNLISLNEVSETLLTNVWMEHSWTDHRLAWNTSEFDDISVLRLPSSMVWLPEIVLENNND
AQFEVAYYCNVLVDSTGFVYWLPPAIFRSSCSINVYYFPFDWQNCTLKFSSLTYNAKEIS
LNLKEEQDPDTEKSYRVEWIIIDPEGFTENGEWEIIHRPARRNIYKSIPMDSNKHQDITF
YLIIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQR
LPETSMAVPLIVKYLMFIMVLVTVVVLNCVIVLNLHFRTPSTHFMTMWTKEFFLEKLPRV
LRMSRPDDSEPRWEGALPRRSSSVGYIAKAEEYYSVKSRSDLMFEKQSERYGLPPRPTST
AVYKSSSDSELTDQLYNELKPAVEGANYIVKHMHKKNDYNEEKDNWSGIARTVDRLCFYI
VTPAMTVGTICIFLTGIYNHPPPLPFEGDAFTYHEADKRFM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagttttttatctgcttccagttttgctctccttctttctgtcaggatgcagc
ggcaggaacgaggaggagcgtctcatcaaccacctgataaaagagcgcggatacaacaaa
gaactgcgtccagttcaaaacaaagacgaggcggtgatgatttatctctcactgatgctc
tccaacctcatctccctgaatgaagtcagcgaaactttactgacaaatgtgtggatggaa
cacagctggactgaccacaggcttgcgtggaacacgtcagagtttgatgacatcagtgtc
ctgcgtcttccatcgagcatggtgtggcttccagagatcgttttggagaacaataacgac
gcccagttcgaggtggcttattactgtaacgtgttggtggactccaccgggtttgtctac
tggttgcctcctgctatcttccgtagttcctgttccatcaacgtctactattttcctttt
gactggcaaaactgcaccttaaagttcagctctttaacatacaatgccaaagagatcagc
ttaaatttaaaagaagagcaggatcctgacaccgagaagagctaccgcgtggagtggatc
atcatcgaccctgaaggattcacagaaaatggagaatgggagatcattcacagacctgcc
agaagaaacatctacaagagcatcccgatggacagcaacaagcaccaagacatcaccttc
tacctcatcatcaaacgcaagcctctgttctatatcgtcaacatcatcatcccctgtgtg
ctcatctctttcctggcctcgctggtgtactacctgcctgcagacagtggtgagaagatg
accttgtccatctcagtgctcttggcccagtctgtgttcctgctcctgatatcgcagcgt
ttacccgagacctccatggctgttccgctgatcgtcaagtatctgatgttcatcatggtt
ctggtcactgttgtggtgttgaattgtgtcatcgtgttgaacctccactttaggaccccc
agcacacacttcatgaccatgtggaccaaagagttcttcctggagaagcttcctcgtgtc
ctccgcatgtcgcgtccggatgacagcgagccgaggtgggagggggcgctgcccagacgc
tccagctctgtgggttacatcgccaaagctgaggagtattacagcgtcaagtcccggagt
gacctgatgtttgagaagcagtcagagagatacggcctgcccccgaggcccacgtccacc
gccgtgtataaatcgagcagcgactcggagctgaccgatcagctgtataacgagctgaag
ccggctgtggaaggagcgaactacatcgtcaagcacatgcataaaaaaaatgactataac
gaggagaaggataactggagtgggatcgccaggacggtggaccgtctctgtttctacatc
gtgactcccgccatgaccgtcggaaccatatgcatcttccttactggaatctacaaccat
ccgcctcctcttccatttgaaggagacgcgttcacttaccatgaggcagacaaacgcttt
atgtga
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