Ictalurus punctatus (channel catfish): 108256829
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Entry
108256829 CDS
T04658
Symbol
ptger1c
Name
(RefSeq) prostaglandin E receptor 1c (subtype EP1)
KO
K04258
prostaglandin E receptor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108256829 (ptger1c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108256829 (ptger1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108256829 (ptger1c)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Lipid
Prostaglandin
108256829 (ptger1c)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
MS_N
Motif
Other DBs
NCBI-GeneID:
108256829
NCBI-ProteinID:
XP_017309540
Ensembl:
ENSIPUG00000006841
UniProt:
A0A2D0PWN5
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Position
24:complement(18578470..18582148)
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AA seq
364 aa
AA seq
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MCQDFNLSFFCQREPNSTSPFPLNPPNFAMSYFTMTFGILSNLIGLAIVSASYTRFHHRA
KTPFLLLAATLLMSDLAGHLVTGAFALHLHLGRVKRQRVASREASEPPQVFCKLFGACMV
FFGLTPLLLGSAMAVERCMGIRQPLQHSAVATTAHIRHCVLLLITMAFTLAALPLFNVGT
YAPQFPGTWCFLPVHGALSSADAGLALAFSSLGLAALTVSVLCNAVSGLTLLQARFNNQG
GKLTASRRRRSSMSSGHLLDVEMMVQLVVITVVSSVCWSPFLIYISMSVRQFYRGDTDPD
PQYKQLLLLGLRMASWNQILDPWVYILLRRAVLQRVCGMLWPSRVIFSHSSSCRSSERPE
IHLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaagactttaacctgtcgttcttctgccagcgtgagccgaactccacgtcgccg
tttcctctcaaccctccaaactttgcgatgtcctacttcaccatgaccttcgggatcctc
tctaacctaatcggcctggccatcgtctccgcatcctacacccgcttccaccaccgagcg
aagacgccatttctgctgctcgcagccactcttcttatgagcgacctggcaggacatttg
gtcaccggcgcattcgctttgcacctccatctcggaagagtcaagaggcaacgagtagca
agcagggaggcaagcgaaccccctcaggttttctgcaaacttttcggtgcctgcatggtc
ttctttggcttgactcctctcctcctgggtagcgccatggccgtggagcggtgcatgggc
atcaggcagccactccagcactctgctgtggccaccacggcccatattcgccactgtgtc
ctcctgctcatcaccatggcctttactttagcagcgctccccttgttcaatgtgggtacc
tacgcacctcagtttcctggtacctggtgtttccttcctgtacacggtgctctctcgagt
gctgacgccggcctggcattggccttctcgagcctgggcctggcagctctaacagtctct
gtactatgtaatgctgtgagtgggctgacgttgctgcaggccaggtttaacaaccaagga
ggaaaactgaccgcctccaggagacgcagatcgtctatgtcatctgggcatttgctggat
gtggagatgatggtgcagctagtggtcataaccgtggtgtcctccgtctgctggagtccc
ttcctcatttacatctccatgtcagtgagacagttctaccgaggcgataccgatccagac
ccgcagtataagcagctgctgctgctgggtttgaggatggcatcctggaaccagatcctg
gacccgtgggtgtacatcctcctgaggcgggccgtgctgcagcgggtgtgtggaatgctt
tggcccagcagagtcatttttagccacagcagctcgtgcaggagttcagagcgaccggaa
atccatttgcactga
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