KEGG   Ictalurus punctatus (channel catfish): 108257404
Entry
108257404         CDS       T04658                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108257404 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108257404 (polr1f)
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     108257404 (polr1f)
SSDB
Motif
Pfam: SHS2_Rpb7-N RPA43_OB
Other DBs
NCBI-GeneID: 108257404
NCBI-ProteinID: XP_017310636
Ensembl: ENSIPUG00000004117
UniProt: A0A2D0PYW9
LinkDB
Position
24:complement(16512532..16518683)
AA seq 362 aa
MANLEQTDHDPELGVTSTDKSAVLNSAPARDAFAVPCLIPSFADARELVNAPYSCLVLHT
HRRHVALPPMYLNKKKTGIQQELNADLLKYSNSFKGVPLAYDGIKIIGQHGDIFDDQGYI
HLNVEASFVIFKPQERQMLMGVINKIGVGHVGCLVHGCFNASVVKPAQLTTEQWRDSGLK
LGGSLIFKVCQLDADVAGVLLIRGRLEKSRVQELIDSFSSADTEQDETVEVATEPDSVTT
EDPSESSDASKLKKKKKKKDKERDKQAVKEMNNNDTDEAVTHHVNGNRMEDDSDPSSCPR
EKKKKKKKDKKQESDAALPSPSADLPGSESSGYISDKSSKKRKVLLTDEADICPAKKKKR
MK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggccaacctggagcagacagatcatgacccggaactcggcgtaacctctacggataag
tccgcggtgttaaactccgctccggctcgcgacgctttcgcggtcccgtgtctgatcccg
agtttcgcggacgcgcgtgagctcgtgaacgcgccgtattcgtgtctcgtgctgcacaca
caccgcagacatgttgctctgccgcccatgtacctgaacaagaagaagaccgggatccaa
caagaactcaacgctgaccttttaaagtactccaacagtttcaaaggtgtgcctttggct
tatgatggcatcaaaattataggacaacatggggacattttcgacgaccaaggctacatt
cacttaaacgtcgaggcatcgtttgtgatattcaagccacaggaaagacaaatgctcatg
ggtgtgataaataaaatcggagtgggccatgtgggctgcctggtgcacggctgctttaat
gccagcgtggtgaagccagctcagctcactactgagcagtggagagactcggggctgaag
ctgggaggcagcctgatcttcaaggtgtgtcagctggacgcggatgtggctggagttctg
ctgatcagaggaaggctggaaaaatcccgggtgcaggagcttattgattctttcagcagc
gcagacaccgagcaggacgagacagtggaagtggccaccgaaccagactcggtcactact
gaagacccctcggagagctcggacgcgtcaaagctcaagaagaagaagaagaaaaaggac
aaagaaagggacaagcaggctgtgaaggagatgaacaacaacgacacagacgaggccgtg
actcaccatgttaacggtaacagaatggaggatgattctgatcccagcagctgtccaagg
gagaaaaagaagaagaagaaaaaggacaaaaagcaggaatcggacgctgcgttgccatcc
cccagcgccgatctcccaggcagtgaatcgagcggatacatcagtgataaaagcagtaaa
aagagaaaagtgctcctcacagacgaagctgacatttgtccagctaaaaagaagaaaagg
atgaagtga

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