Ictalurus punctatus (channel catfish): 108258482
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Entry
108258482 CDS
T04658
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108258482 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108258482 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108258482 (grin2bb)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108258482 (grin2bb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
108258482
NCBI-ProteinID:
XP_053532332
UniProt:
A0A9F7RBI4
LinkDB
All DBs
Position
26:13528059..13622611
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AA seq
1537 aa
AA seq
DB search
MNETDPKSIITRICALMSRHWLQGVVFGDDTDHEAIAQILDFISAQTHIPILGIRGGSSM
IMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNRIRSTVDN
SFVGWELEEVLLLDMSVDDGDSKIQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGY
GYTWIVPSLVAGDADIVPNVFPTGLISVSYDEWDYGLEARVRDAVAIIAMATSTMMLDRG
PHTLLKSGCHGAPEKKGPKGGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLDK
ERQWDRVGKWENGSLTMKYHVWPRFELYSDAEERDDDHLSIVTLEEAPFVIVEDVDPLSG
TCMRNTVPCRKQLKAQNQTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHG
KKINGTWNGMVGEVVFKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSP
SAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIW
LLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLS
DKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYKEMHSYMTSFHQKNVDEALHSLKTGKLD
AFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSGWKRPVDLAILQLFGDG
EMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHLFYWQLR
FCFMGVCTGKPGLTFSISRGIYSCIHGVQIEENKSGLNSPSATMNMNMNNTHSNILRLLR
TAKNMTSVPGVNGSPHSALDYGHRESAVYDISEHRRSLAGHSDCKPPPPYLPEDNMFSDY
VSDVERTFGNMHLKDSNLYQDHYLHHHGGTGSGLALGMSGPLPNRPRSLGSASSLEGGMY
DCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSGLPDLYGKFSFKGGASS
SGFIAGHDRYCGGGGAGSGGDDGNIRSDVSDISTHTVTYGNLEGNAKRRKQYRDSLKKRP
ASAKSRREQDEIELGFRRRTHHTIHHHHHHHPVTQGHRSATPPVERKSLRGGNSSYMFRD
KDNLRDFYIDQFRSKEGASQWEHLDLSDAPGIGGGGACTSLVPVDDFLKGKSKKTEWVGG
LAGGDWECRNCHSGGNKPVCMHGGGGGVGGSSGGGGGSGQASSRPSSATCKRCDSCKKPG
NLYDISEDNHLLLDQIGSGGAQTQVQRRKFGPGGRVLRRQHSYDTFVDLQKEGAGRMGGS
GGFGGASVLPQPRSVSLKEKDRYMEGASPYAQMFERYMGGERETTFFSGGDRGKGGGSSF
NLFRGGEGGLHRRSVGERDMRDRDRGMMGGGMGGTRGVGTYSLSKSLYPDKVNQNPFIPT
FGDDQCLLHGAKSYYIKKQQAQPQHSASAGVLSNVGPRFPKELCLAGPLSNHHGGATGNN
KLLSSRDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacagacccaaagagcatcatcacgcgcatatgtgcgctcatgtcccgccac
tggctccagggcgtcgtgtttggagatgacacagaccacgaggccattgcccagatcctt
gacttcatctcagcgcagacccacatccccatcctgggcatccgtggaggctcctccatg
atcatggctgccaaggatgacaactccatgttcttccagttcggcccgtctatagagcag
caggcctcagtcatgctcaacatcatggaggagtacgactggtacatcttctccatcgtt
actacctactaccctgggtaccaggacttcgtcaacaggatccggagtaccgtagataat
agctttgtgggctgggaactggaggaggtgttgctgctcgatatgtcagttgacgatggc
gactctaagattcagaaccagatgaagaagctccagagccccgtcatactgctctactgc
actaaagaagaggccaccaccatttttgaggtggcgcattcggtcggcctgactggatat
ggttacacctggatcgtaccatcgctggtagcaggggacgccgacatcgtgcccaacgtc
tttcctacaggtctgatctcggtgtcctatgatgagtgggactatggactggaggcgcgt
gtgcgtgatgccgtggcaatcattgccatggcaacctccaccatgatgctggacagaggt
ccccacacactgttgaagtcaggttgccacggtgcccctgaaaagaaaggcccgaagggg
gggaaccccaatgaagttctgagatacctcatgaatgtgacattcgaggggcgcaatctc
tccttcagcgaggatggctaccagatgcaccccaagctggttattattttgctggataag
gagagacagtgggacagggtgggtaagtgggagaatggctcgctgaccatgaagtaccat
gtgtggccacgctttgagctctattcagacgcagaagaaagggatgatgaccacctgtct
atcgtcacactggaggaggccccatttgttattgtggaggatgtggaccccctcagtggg
acctgcatgaggaacacggttccctgcagaaaacagctcaaagcccaaaaccaaacagga
gattcagggatctatatcaaacgctgttgcaagggcttctgcatagacatcctcaaaaag
atcgctaaatctgtgaagttcacctacgacctctacctagtgaccaatggaaaacacggc
aagaagatcaatggcacgtggaatggcatggtgggcgaggtggtgtttaagaacgcccac
atggcggtgggctctctgaccatcaacgaggagaggtcagaagtcattgacttctccgtc
cccttcatagagacgggcattagtgtcatggtctcacgtagcaatggcaccgtgtctcct
tctgcatttttagaaccgttcagtgctgatgtgtgggtgatgatgtttgtgatgctgctg
atcgtatctgctgtggcagtctttgtctttgagtacttcagtccggttggctataaccgc
tgtctggcggatggacgagagccaggtggtccctcgttcacaatcggaaaggccatatgg
ctgctctggggtctagtcttcaacaactctgtgcctgtacaaaaccccaaaggcaccacc
agtaagataatggtatcagtgtgggccttctttgctgtgatcttcctggccagttacact
gccaacctggctgctttcatgatccaagaggagtacgttgaccaggtgtctggcctcagt
gataagaagttccaacggccaaatgacttttctccgccattccgttttggcacagttccc
aatggcagcacggagaggaacattaggaacaactacaaagagatgcacagctacatgacc
agcttccaccagaaaaacgtagacgaggccctccacagcctgaaaacaggaaaattggat
gcatttatctatgatgctgctgtgctgaactacatggcgggcagagatgagggctgcaag
cttgtgacaatcggtagtggttatatattcgctaccacaggctacggcattgccatccag
aaagattctggttggaagagacctgtggacctggccattctgcagctatttggagatggt
gagatggaggagctggaggcactgtggttgactgggatttgtcacaatgagaagaatgag
gtgatgagcagccagctggacgtcgacaacatggccggcgtcttctacatgctgggggcg
gcaatggcgctgtcgctcatcaccttcatagctgagcacctgttctactggcaactacgc
ttctgctttatgggcgtgtgtacgggcaagcccggcctgaccttctccattagcaggggc
atctacagctgcatccatggtgttcaaatcgaggagaacaaatcaggcctcaactctccg
tcagccaccatgaacatgaacatgaacaacacccactctaacatccttcgcttgctgcgc
acagctaaaaacatgacctccgtgcctggggtcaatggctccccccacagtgccctggac
tatggccaccgtgagtcggctgtctatgacatcagtgagcatcgacgcagtctggcaggc
catagtgactgcaagcccccacctccttatctgccagaagataatatgttcagcgactat
gtgagtgatgtggagaggacttttgggaacatgcatctgaaggacagtaacctgtaccag
gatcattacctgcatcaccatgggggcacgggatccggactggctctgggtatgtcgggt
cccttgcctaaccgacctcgtagcttaggcagtgccagctcattggagggagggatgtac
gattgtgacagtttagggggaggggtagcacctattttcaccacccagccccgccagtcg
ctgacacacaggaacagggaaaagtttgacctgattgcaggccaccccacccaatcgagc
ttcaagtctggcctgcctgatctatatgggaagttttccttcaaaggtggggcgtccagt
tcagggtttatcgcgggacatgacaggtactgtgggggaggtggggcgggctcgggaggg
gatgacggaaatatccgttctgatgtgtcagatatttccactcacaccgtgacttatgga
aatcttgaaggcaacgctaagcgacgcaagcagtacagggacagcctgaaaaaaaggcca
gcatctgccaagtcacgccgggaacaggatgaaattgagctgggcttccggaggcgcacc
caccacaccatccaccaccaccaccaccatcatcctgttacacaagggcaccgttcagct
accccacctgtggaacgcaagagcctgagagggggaaactcctcatacatgttccgtgac
aaagataatctgagggacttctacattgaccagttccgatccaaggaaggggcatcccag
tgggagcacttggatttgagtgatgctcctggaataggtggcggaggggcgtgcactagt
ttggttcctgtggacgatttcttgaaaggtaaatccaagaagacagagtgggtggggggt
ttggccggaggggattgggaatgccgtaactgccatagcggaggcaacaagcctgtttgc
atgcatgggggaggaggaggtgtagggggatcaagtggaggaggtgggggtagtggacaa
gcctccagtcggccaagctcagccacttgcaagcgatgcgattcatgcaagaagccaggc
aacttgtatgacatcagtgaggacaaccacctcctcctggatcagatagggagtggaggg
gcccaaacccaggtgcagaggcgcaagtttggcccagggggcagggtgttacgtaggcag
cattcctatgacacatttgtagaccttcagaaagaaggggcgggtaggatgggaggctct
ggggggtttggaggagcatctgtgcttcctcaaccccgaagtgtgagcctgaaagaaaaa
gatcgctacatggaaggtgcaagcccatatgcccagatgtttgagcggtatatgggaggg
gagcgagagactacgttttttagtggtggggaccgggggaagggaggtggctcatcgttt
aacttgttccgtgggggtgagggtgggttgcaccgtcgctcggtaggcgaaagagacatg
agggacagggatagaggcatgatgggaggaggtatgggaggtacccgaggggttgggact
tactccttgtctaaatctctctacccagataaggtgaaccagaacccattcatcccaacc
ttcggcgatgaccagtgcctattacatggcgccaaatcgtactacatcaaaaagcagcag
gcacagccgcagcactctgcctctgctggggttttgtccaacgtgggaccccgttttccc
aaggagctgtgcctggctgggcccctcagcaaccaccatggaggggcaacaggcaacaac
aagctgctgtcatcaagggacgggttagggatggggcaaggacagagacctttcaatggc
tcaagtaatggacacgtatacgagaagctctccagcattgaatctgatgtctga
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integrated database retrieval system
