Ictalurus punctatus (channel catfish): 108263181
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Entry
108263181 CDS
T04658
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03020
RNA polymerase
ipu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108263181
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108263181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108263181
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108263181
RNA polymerase I system
RNA polymerase I
108263181
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
108263181
NCBI-ProteinID:
XP_017319219
Ensembl:
ENSIPUG00000024464
UniProt:
A0A2D0QLQ5
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Position
3:complement(20637458..20647148)
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AA seq
348 aa
AA seq
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MAVPMSNVDEIRDRVILGEFGVKNVHSTNFPGNYPGYDDTWDLGKFKKNFRLDVVHMDEN
TLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVFIYNNTSIIQDEILAHRLGLVPIKADP
RLFEYRNTGDEEGTEIDTIHLQLKIKCTRNPRASKDASDPKELYLNHMVYSRDMKWVPIG
NQADVFADANIGPVHGDILLAQLRPGQELDIVMHCVKGIGKDHAKFSPVATASYRLLPEI
TLLKTIEGEKAERLKRCFSPGVIELEDVDGKQVAKVVNSRLDTCSREVLRHDDLKSLVKL
GRVRDHFLFSVESTGILPPDVLFSEAVNVLIAKCQKFLTELDSVNEME
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctatgagcaacgtggatgagatccgtgatagagtgattttgggcgaattt
ggcgtaaaaaatgttcattctacaaattttcctggtaattatcctggttatgatgacaca
tgggacctcgggaagttcaaaaagaatttcaggctcgatgtcgttcatatggatgagaac
acgttggagtttgacatggtgggaatagacgctgccattgctaatgctttcaggcggata
ttactagctgaggtcccaaccatggctgttgaaaaagttttcatttacaacaatacgtct
ataattcaagatgagatcctagcacataggcttggcttggtaccgatcaaagctgatcct
cgtctttttgagtacagaaatactggtgatgaggaaggcacagaaattgacacaattcat
cttcagctgaagatcaaatgcacaaggaatcccagggcatctaaagatgcctctgatccc
aaagaattatacctcaatcacatggtgtattcaagggacatgaagtgggtacctattgga
aatcaggctgatgtgtttgctgatgctaacattggtcctgtgcatggagacatactgttg
gcacagcttcggccaggacaagagctggatatagttatgcactgcgttaaaggaataggt
aaggaccatgcaaagttttccccagttgccaccgcaagttataggctacttcctgagatc
acattactgaagaccattgaaggagaaaaagctgagagattaaagcgctgcttctcacct
ggagttattgaattggaggatgttgatggaaaacaggtggctaaggtggtcaacagtcgt
ctggatacatgcagcagagaagtgcttaggcatgatgacctaaagagtttggttaaactc
ggaagagtgcgggaccatttcttattctcagtggagtctactggaattttaccacccgat
gtcctgttcagtgaggccgttaatgtactcattgcaaagtgccagaaatttctgactgag
cttgattcagtgaatgaaatggaatag
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