Ictalurus punctatus (channel catfish): 108264480
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Entry
108264480 CDS
T04658
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108264480
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
108264480
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108264480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_22
AAA_14
TIP49
AAA_33
AAA_7
AAA_2
bpMoxR
AAA_25
NTPase_1
Viral_helicase1
RNA_helicase
DUF815
Rad17
AAA_18
ABC_tran
AAA_19
Vps4_C
NACHT
AAA_17
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
108264480
NCBI-ProteinID:
XP_017321550
Ensembl:
ENSIPUG00000016296
UniProt:
A0A2D0QVP0
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MRPELLVLPPEHSDLGTQRCRLGPAVMEDLGLRLGSPVLVTLPGGASCLCTAWPRPDLAD
AYLQLDPTCSSPNLHPDALRGLRLGAERLTALRCPRVKRLRVTALVQGGEYRRRTSAQAV
GALAAELLTGLYVHEKHLVNISHAGTPIHFLQVDSVNSGSHKAGRVTSETRLDVVSVRTV
ETHRRWAREGSAVPLGGLEEVRASLKEMLTLPLRYPISTQRVGVAVGRGALLVGPPGVGK
TQLVRSVARDVQAALVTVSGPVVVGSRPGESEENLRAAFTRASEAAREEPCVLFIDEIDA
LCPKRSSSTGTPENRLVAQLLTLMDGIGSDEGFVIIGATNRPDALDPALRRPGRFDREIV
VGVPTLQQRYRVLQCVCRSVPLSASVDLNSIAEMTSGYVGADLSALSREATLQAILHSTQ
GGAGNSGQSGGEDGKVRMEHFVKALRLVPPSCLRSSVGVAEFTPVSWERIGGLEEVKLKL
RQSVEWPMKFPEAFVRMGVCRARGVLLYGPPGCAKTTLVKAAASSSHCSFLTLSGAELYS
PYVGDSERTLAKLFRQARACSPSVVFLDEIDSMVGCRDDGGGSCGSSVQAQVLSVLLNEL
DGVGFKTAERRGTAPSKRDKERAHRDQRMQLQEACNQDVMIVAATNRPDMLDSALLRPGR
FDHIIYVPPPDLQARLAILQLHTEKMPLNSDVCLEDLATQTNLFSGADLENLCKEAALLA
LHEEGMSVSAVQQKHFQKVLQNFQPSISSQQLLQYQQLFKHSYR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggagctgctggttctcccgccggagcactcggacctgggtacgcagcggtgc
cgtctgggcccggcggtgatggaggatctcggtctgcgtctcggctctccagtgctggtg
acgctgccaggcggagcttcctgtctctgtacagcatggccacgccccgacctggccgac
gcctacctgcagctggaccccacctgctcctcgccgaacctccacccggacgcgctccgt
ggactccggctcggggcggagcggctcacggctctgagatgtccacgtgtgaagcgtctg
cgtgtgactgcgctggtgcagggtggagagtatagacgcaggacgtctgcgcaggcggtc
ggggcgctggctgcggagctgctcaccgggctgtacgtccacgagaagcacctggtgaac
atctcgcatgcaggaacacccattcacttcctgcaggtggacagcgtgaactcgggttct
cataaagcgggacgcgtgacgtctgagactcgcctggacgtggtgtcggttcggacggtg
gaaacacaccggcgctgggcgcgtgagggttctgctgtgcctttgggaggactggaggag
gttcgagcctcgctgaaggagatgctgacgctcccgctgcgttatccaatcagcacgcag
cgtgtgggcgtagcggtggggcgtggcgcattgctggtgggacctccgggcgtggggaag
acgcagctggtacgcagcgtggcgcgggacgtgcaggcagcactggtgacggtgagcggg
ccggtggtggtggggtcgcgccccggagagagcgaggagaacctgcgtgctgcgtttact
cgagcctcagaagcagcccgagaggaaccgtgtgtgctcttcatcgatgagatcgacgcg
ctgtgtccgaaacggagctccagcaccggaaccccggagaaccgtctcgtcgctcagctc
ctcaccctcatggacggaatcggcagcgatgaagggttcgtcatcatcggagccaccaac
cggccagacgccctcgacccggcgctcaggagacccggtcgcttcgacagagagatagtt
gtaggtgttcccactctgcagcagcggtaccgggttctgcagtgtgtgtgtcgcagtgtt
ccgctctccgcgtctgtagatctcaactccatcgccgagatgacgagcggatacgtgggg
gcggatctgagcgcgctcagtagagaggcaacgctgcaggctatactacactctacacag
ggcggagctggaaattccggccaatcagggggtgaggatggtaaagtgagaatggagcat
tttgtgaaagcgttgcgattggtccctccctcctgcctgaggagcagtgtgggcgtggct
gagtttacacctgtgagctgggagcgaatcggaggactggaggaagtaaagctcaaactc
agacagagtgtggagtggccgatgaagttccccgaggcgtttgtgcgtatgggtgtgtgt
cgtgcgcggggtgtgttactgtacgggccgccgggctgcgctaagaccacgctggtgaaa
gcagcagcatcttcatcacactgcagcttcctcacactgagcggggcggagctgtactct
ccctacgtaggggactcggagaggacactcgctaagctgttccgtcaggcgcgagcgtgt
tctccctccgttgtgtttctggatgagattgacagcatggtgggttgtcgtgacgacgga
ggcggttcctgtggtagcagtgtacaggctcaggtgttgtctgtcctgctgaatgagtta
gacggtgtgggctttaaaaccgctgagagacgagggacagcaccgagtaagagggacaaa
gagagagcacacagagaccaacggatgcagctacaggaagcatgtaatcaggatgtgatg
attgttgctgccactaacaggccggacatgttggacagcgctctgctccgccctggacga
ttcgaccacatcatatacgtccccccacctgacctacaggctcgtctggccatcctgcag
ctccacacagagaaaatgccgctgaactcggatgtgtgtttggaggatctggcaacccag
acaaacctgttctccggagccgacctggaaaacctctgcaaggaggcggctctgttagcc
cttcatgaagaaggtatgagtgtgtcagcagtgcagcagaaacacttccagaaggttcta
cagaatttccaaccatctatcagctcacagcagctcctgcagtaccaacagctcttcaaa
cacagctaccgttag
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integrated database retrieval system
