Ictalurus punctatus (channel catfish): 108265127
Help
Entry
108265127 CDS
T04658
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00531
Glycosaminoglycan degradation
ipu01100
Metabolic pathways
ipu04142
Lysosome
Module
ipu_M00076
Dermatan sulfate degradation
ipu_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108265127 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108265127 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ipu02042
]
108265127 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108265127 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108265127 (si:dkey-72l14.3)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
108265127 (si:dkey-72l14.3)
Bacterial toxins [BR:
ipu02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
108265127 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Enzymes
108265127 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Enzymes
108265127 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
108265127
NCBI-ProteinID:
XP_047011640
Ensembl:
ENSIPUG00000006523
UniProt:
A0A2D0QWF1
LinkDB
All DBs
Position
5:complement(27262767..27266788)
Genome browser
AA seq
513 aa
AA seq
DB search
MDHRRTSNPLFPLLLLLFVACPCLSGPARSPLLPGQPFLILWAVPNKDCLGRPDPSAFGM
EWEGRVAEFYEDSLGLYPYFNTEGEPVNGGLPQHTSLERHLQKVEGDLTATLPQTGMPGL
GVLRWKEWEPQWSRNLGNQRKYLQTSRALLRGFFPGWSTDEVEKWAQVDFEAAAQFILME
TLRELKRLRPQRLWGMAPYPSCYNSDPNQMLLGNYTGHCPAAEMALNDELMWLWKRSDAL
YPILALEKLPDGTKGAWLYASNQIREALRVAALAGTTFELPVFPLVKSMYISSSSFLSEA
NLVNTVGESAALGAAGVIIWDRFLTTKTQKLCSDLTSYVQEVLGPYAVNVTMATRLCSMS
LCKGLGRCVRKKAEDPVYLHLPPAHFLLLRRGAEGIRATGQLPQYYLDGWRRDFHCHWFE
ALEGAAADQESVGIESGGQRSLPTIKPNNIAIHIVGTYGQSEGIEKTFGQSEETVAPMTP
AEQEPSKSGCPAHFVTIILLCVPTFFSFTNFNF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggatcatagaagaacctccaacccccttttccctctccttctgctcctctttgtcgcc
tgtccatgtctgagtgggccagcacgctctcctctcctgcctggtcagcccttcctgatt
ctttgggccgtaccaaacaaggactgtcttggtcgccctgatccgtcagctttcggaatg
gagtgggagggacgtgttgctgaattttatgaggactcactgggactttacccatatttc
aatacagagggagagcctgtgaatggcggcctgccccagcacaccagcctggagcgccac
cttcagaaagtggaaggggaccttacagcaactttgccacagacaggaatgcctggcctc
ggagtgctgaggtggaaggagtgggagccacagtggagccgaaacctggggaatcagcgg
aagtatttgcagacatcgcgagcattgctccggggttttttcccaggctggagcacagac
gaggtggagaaatgggctcaggtggactttgaagcagcagcccaattcatactcatggag
accctgagagagctcaagagactccgcccacagagactgtggggcatggctccataccca
agctgctacaactctgatcccaatcagatgctgctaggcaattacacgggccactgccct
gctgcagagatggcactaaatgatgagctcatgtggctatggaagcgaagtgatgcactt
taccccatccttgcactggagaaactccccgatggaactaagggtgcatggctgtatgca
tccaatcagatcagagaggcattaagagtggcagctctagcagggacaacatttgagctt
cctgtttttccactggtcaagagtatgtacatctcttccagtagctttctctccgaggct
aatttggtgaatactgtgggagagagtgctgcactgggtgcagcaggagtcattatctgg
gacagattccttactactaaaacacagaagttgtgctctgatcttacctcatacgtgcaa
gaagtccttggcccctatgctgtcaacgtaaccatggcaacacgtctttgcagcatgtca
ctttgcaagggccttggccgctgtgtacgcaagaaagcagaagaccctgtctacctgcac
cttcctcctgcccacttcctgctgctacgccggggagcagagggcatccgagcaacgggg
caactcccccagtattacctggatgggtggagacgggactttcactgccattggtttgag
gcattggaaggagcagctgctgatcaggagtcagttgggattgagagtggtggtcagagg
tcactgcccacaataaagccaaacaatattgctattcatattgtgggcacatatggtcag
agtgaagggattgagaagacatttgggcaaagtgaggagacagtggctcccatgacgcct
gctgaacaagaaccgtcaaaaagtggctgccccgcccactttgtgaccatcatacttctc
tgtgttccgacattcttcagcttcacaaactttaacttctaa
DBGET
integrated database retrieval system
