Ictalurus punctatus (channel catfish): 108265194
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Entry
108265194 CDS
T04658
Name
(RefSeq) frataxin, mitochondrial-like
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
108265194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108265194
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
108265194
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
108265194
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Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
Rhabdo_ncap_2
Motif
Other DBs
NCBI-GeneID:
108265194
NCBI-ProteinID:
XP_017322810
UniProt:
A0A2D0QZ73
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Position
5:28371286..28379445
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AA seq
206 aa
AA seq
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NENDALTNSSLFPDTSDLLKRVEPFNRAELYSRARCGFSSTNSARPEFNPAASWATRAWT
DVAHGHVQRRGLYLTVPLAEENTLQSKELTEAIYEKLADETLDALAEYFEDLADESFTDA
QDYDVVFSSGVLTVKVGGGHGTYVINKQKPNRQIWLSSPTSGPKHYDWTGERWVYAHDGM
ALHDLLSKEFSAIFQSNIDLSHLLHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
aatgaaaatgacgcactgacaaacagctcgctttttccagatacgtctgacctcttaaaa
cgagtcgagccatttaatagagctgagctttacagtcgggcaagatgtggattttctagc
actaactcagcaaggccagagtttaatccagctgcatcgtgggccaccagagcttggacg
gatgttgcacatggacacgtacaaagaagaggactttacttgaccgttccccttgcagaa
gaaaacacacttcaatccaaggagctgacagaagccatctatgagaagctggctgatgag
acgctggatgcgttggcagaatattttgaggatctcgccgatgagagctttactgatgcg
caagattatgacgtggtgttttctagcggtgtcctgactgtgaaagtaggaggtggccat
ggcacttacgtcatcaataaacaaaaacccaacagacagatttggctctcctctcctaca
agcgggccgaaacattacgattggacaggagaacgctgggtgtacgcccacgacggcatg
gccttgcacgatcttctctctaaagagttttctgccatctttcagtcaaatatagacctg
tcacatctcctccattcctga
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