Ictalurus punctatus (channel catfish): 108265371
Help
Entry
108265371 CDS
T04658
Name
(RefSeq) frataxin, mitochondrial
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
108265371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108265371
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
108265371
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
108265371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
Rhabdo_ncap_2
Motif
Other DBs
NCBI-GeneID:
108265371
NCBI-ProteinID:
XP_017323111
UniProt:
A0A2D0QZC3
LinkDB
All DBs
Position
5:28307656..28317853
Genome browser
AA seq
215 aa
AA seq
DB search
MSRLTNKPYSLCVCFLKSRWKCPQRLSKSSSFTSGVRTEEVKARCGFSSTNSARPEFNPA
ASWATRAWTDVAHGHVQRRGLYLTVPLAEENALQSKELTEAIYEKLADETLDALAEYFED
LADESFTDAQDYDVVFSSGVLTVKVGDGHGTYVINKQKPNRQIWLSSPTSGPKRYDWTGE
RWVYAHDGMALHDLLSKEFSAIFQSNIDLSHLLHS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttaacaaataaaccttacagtttgtgtgtgtgtttcctgaagagcaggtgg
aaatgtcctcagcgtttgtccaaatcatcttcgttcacgtctggagtgaggaccgaagaa
gtaaaggcaagatgtggattttctagcactaactcagcaaggccagagtttaatccagct
gcatcgtgggccaccagagcttggacggatgttgcacatggacacgtacaaagaagagga
ctttacttgaccgttccccttgcagaagaaaacgcacttcagtccaaggagctgacagaa
gccatctatgagaagctggctgatgagacgctggatgcgttggcagaatattttgaggat
ctcgccgatgagagctttactgatgcgcaagattatgacgtggtgttttctagcggtgtc
ctgactgtgaaagtaggagatggccatggcacttacgtcatcaataaacaaaaacccaac
agacagatttggctctcctctcctacaagcgggccgaaacgttacgattggacaggagaa
cgctgggtgtacgcccacgatggcatggccttgcacgatcttctctctaaagagttttct
gccatctttcagtcaaatatagacctgtcacatctcctccattcctga
DBGET
integrated database retrieval system