Ictalurus punctatus (channel catfish): 108266829
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Entry
108266829 CDS
T04658
Symbol
gad1a
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00250
Alanine, aspartate and glutamate metabolism
ipu00410
beta-Alanine metabolism
ipu00430
Taurine and hypotaurine metabolism
ipu00650
Butanoate metabolism
ipu01100
Metabolic pathways
Module
ipu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108266829 (gad1a)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108266829 (gad1a)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108266829 (gad1a)
00430 Taurine and hypotaurine metabolism
108266829 (gad1a)
Enzymes [BR:
ipu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
108266829 (gad1a)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SepSecS
Beta_elim_lyase
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
108266829
NCBI-ProteinID:
XP_017326094
Ensembl:
ENSIPUG00000020814
UniProt:
W5UAL4
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Position
6:23458700..23472859
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AA seq
592 aa
AA seq
DB search
MAAPTAPSSSSSSSCGGEPNPNTTNLRPPASSYDWTGVAHGCTRKLGMKICGFLQKNNNL
DEKSRIVASLNEQSSPQKLGLQDSRFRRDDTDFSNLYARDLLPAKNGEEPTIQFLLEVVE
ILTNYVRKTFDRSTKVLDFHHPHQLLEGIEGFNLELADQPESLEQILVDCRDTLKYGVRT
GHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIVGWPNG
EGDGIFSPGGAISNMYSVMIARYKHFPEVKTKGMTAAPRLVLFTSEHSHYSIKKASAVLG
FGTENLILLSTDERGRVIPADLEAKVVDAKCKGYVPFFVSATAGTTVYGAFDPISEIADI
CEKYNMWLHVDGAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVPLQCSAILVREKG
LLQGCNSMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEKHIDR
CLELSEYLYTKIKNREGFEMVFQGQPQHTNVCFWYIPPSLRGMPDKEERRQRLHKVAPKI
KAMMMECGSTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLVDEIERLGLDL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgacggctccttcctcctcctcctcctcctcttgcggcggcgagcccaac
cccaacacgacaaatttacggccacctgcgtcaagctatgattggactggggttgcacac
ggatgtacgagaaagctcgggatgaagatatgtggatttttgcaaaagaacaacaatctt
gatgaaaagagtcggattgtggcttctctgaatgaacagtcatcaccacagaagctcggt
ttacaggactcacgcttccggcgtgatgacacagacttctccaacctgtatgcaagggat
ttactgcctgccaagaatggtgaagagcctacaatccagttcctactggaagtggtggaa
attctcacaaactatgtacggaagacatttgacagatccacgaaagtgctggacttccac
catccacaccagctcctggagggtatagagggctttaacttggagctcgcagaccagccc
gagagcctggagcagattcttgtagactgcagagacacactcaaatatggtgtcaggaca
ggtcatcccaggttttttaaccaactgtctactgggctggacatcattggcttggctggg
gaatggctcacctcaactgcaaacactaatatgttcacatatgaaattgctccagtgttt
gtgttgatggaacagctgactctgaaaaaaatgagggagattgttggctggccaaatgga
gaaggagatggaatattctccccaggaggagcgatctctaacatgtacagtgtgatgata
gctcgctataagcacttccctgaagtgaagactaaaggcatgactgcagccccaaggctc
gtgttgttcacttctgaacatagtcattactccataaaaaaagccagtgcagttctcggc
tttgggacagagaacctgattctgctgagtacagatgagagaggtagagtcattcctgct
gatttggaggccaaggttgttgatgccaaatgcaagggctacgttccattttttgtgagt
gccacagccggtactacagtttacggtgctttcgaccccatcagcgagattgcagatatc
tgtgagaaatataacatgtggctccatgtggatggagcatggggaggtggactgttgatg
tccagaaagcacaggcacaaacttaatggcattgagagggcaaattctgttacatggaat
cctcacaagatgatgggcgttccactacagtgctctgccattctggtcagagagaaggga
cttctccagggctgcaactctatgtgtgctggctatcttttccaacctgataaacagtat
gatgtctcctatgatactggagacaaggccatacagtgcggccggcatgtggacatcttc
aagttctggctcatgtggaaggcaaagggtaccattggattcgaaaagcatatagaccgg
tgtctggagctctcagagtatctctatacaaagatcaaaaatagagaaggctttgagatg
gtgttccagggacagcctcagcatactaatgtgtgcttctggtatattccaccgagcctg
cgtggcatgccagataaagaggagaggaggcagaggctccataaggtggctcctaaaatc
aaggcaatgatgatggagtgtggctcaacaatggttggctaccagcctcaaggtgacaag
gtcaacttcttcaggatggtcatttccaaccctgctgccaccaggtcagatatcgacttc
ctggtcgatgagattgaaagactgggcctggatttataa
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