Ictalurus punctatus (channel catfish): 108268242
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Entry
108268242 CDS
T04658
Symbol
tubb2
Name
(RefSeq) tubulin beta-2A chain
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108268242 (tubb2)
09144 Cellular community - eukaryotes
04540 Gap junction
108268242 (tubb2)
09142 Cell motility
04814 Motor proteins
108268242 (tubb2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108268242 (tubb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108268242 (tubb2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108268242 (tubb2)
04147 Exosome [BR:
ipu04147
]
108268242 (tubb2)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108268242 (tubb2)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108268242 (tubb2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108268242 (tubb2)
Exosomal proteins of colorectal cancer cells
108268242 (tubb2)
Exosomal proteins of bladder cancer cells
108268242 (tubb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
108268242
NCBI-ProteinID:
XP_017328597
UniProt:
A0A2D0RDI3
LinkDB
All DBs
Position
7:34986873..34995230
Genome browser
AA seq
457 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDYSGTYNGDSKLQLERINVYYNEASGGKFV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
RKESENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMTTFSVTPSPKVSDTVV
EPYNATLSIHQLVENTDETFSIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
TACDPRHGRYLTVAAIFRGRMSMKEVDEQMLSVQNRNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS
EYQQYQDATAEEAEEYEEDEMEEEEDIRHDGRQEGHH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtgcacattcaggccggacagtgtggaaaccagattggagcaaagttc
tgggaggtgatcagtgatgaacatggcatcgactacagtggaacttacaatggagacagc
aagctgcagctggagaggatcaatgtctattacaatgaggcctcaggggggaagtttgtg
ccccgtgccatcctggtggatctggagcctggcaccatggactcagtacggtccggtccc
tttggacaaatcttcaggcctgataactttgtgtttggtcaaagtggcgctgggaacaac
tgggccaaaggtcactacactgagggtgcagagctagtggacgctgtgctggatgtggta
cgtaaggagtcggaaaactgcgactgcctgcaaggattccagctcacgcactctctgggt
ggtggcacaggctcgggcatgggcacactgctcattagcaagatacgtgaagagtaccct
gatcgcatcatgaccacgttcagtgtcacaccgtcacccaaagtgtctgacacagtggta
gagccatacaacgccacactgtccatccaccagcttgtggagaacacagacgagaccttc
agcatcgacaatgaggcactgtacgacatctgcttccgcacacttaagctgaccacgccc
acctatggtgatctcaaccatttggtttctgctgccatgagtggtgtcacaacatgtctc
cgttttccagggcagcttaatgcagacttgcgcaagcttgcagtcaacatggttcctttc
cctcgcttacacttctttatgcctggatttgcacccttgaccagcagggggagccagcag
taccgtgcactcactgttcctgaattaacacagcagatgtttgacgccaagaacatgatg
acggcgtgcgacccgcggcatggacgttacctcactgtagcagctatcttccgtggtcgc
atgtccatgaaggaggtggatgagcagatgctgagtgtgcagaacaggaacagcagctac
tttgtcgagtggatccccaacaatgtgaagacagctgtgtgtgacatcccaccacgcgga
cttaagatggccgccacctttattgggaacagcacggccatacaggagctgttccgacgt
atctcagagcagttcactgccatgttccggagaaaggctttcctacactggtacacaggg
gaggggatggatgagatggagttcactgaggctgagagcaacatgaatgacctcatctct
gaataccagcagtaccaggatgccacagccgaagaagcagaggagtacgaggaagacgag
atggaggaggaggaggatatacgccatgatggccgccaagagggtcaccactga
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